Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 GAPDHP14-201ENST00000450472 937 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS3Q969F9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS3Q969F9 RN7SL610P-201ENST00000463845 291 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AL161747.1-201ENST00000480068 358 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC093534.1-201ENST00000504977 132 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC034244.1-201ENST00000507687 207 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS3Q969F9 SNORA3.4-201ENST00000515969 96 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC023632.1-201ENST00000518463 375 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AL049779.2-201ENST00000553847 315 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AC090751.1-201ENST00000566966 267 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HPS3Q969F9 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS3Q969F9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HPS3Q969F9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AP001269.3-201ENST00000588718 329 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AC091057.2-201ENST00000602594 792 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 MTND3P19-201ENST00000603825 345 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AL021707.7-201ENST00000607991 416 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.72□□□□□ -1.49
HPS3Q969F9 AC092954.1-201ENST00000609121 445 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AL592148.2-201ENST00000612210 372 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC090527.3-201ENST00000619041 548 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 AC016717.3-201ENST00000624730 554 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS3Q969F9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.72□□□□□ -1.49
HPS3Q969F9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HPS3Q969F9 STX3-208ENST00000641815 3236 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
HPS3Q969F9 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.72□□□□□ -1.49
HPS3Q969F9 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
HPS3Q969F9 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HPS3Q969F9 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.72□□□□□ -1.49
HPS3Q969F9 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HPS3Q969F9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HPS3Q969F9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS3Q969F9 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HPS3Q969F9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.71□□□□□ -1.5
HPS3Q969F9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HPS3Q969F9 NACA3P-201ENST00000359690 648 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 MIR600-201ENST00000385007 98 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 OR8V1P-201ENST00000395193 873 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 MTND4P13-201ENST00000402078 1023 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 MIR1182-201ENST00000408363 97 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AL121878.1-201ENST00000418638 859 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AC093655.2-201ENST00000425735 631 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 BX323845.1-201ENST00000432417 179 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.71□□□□□ -1.5
HPS3Q969F9 RPS11P7-201ENST00000442125 465 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 BX842559.2-201ENST00000451418 605 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.71□□□□□ -1.5
HPS3Q969F9 COPS8P2-201ENST00000473228 627 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.71□□□□□ -1.5
HPS3Q969F9 RPL21P6-201ENST00000479171 504 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 COX6B1P2-201ENST00000489624 230 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AC097173.1-201ENST00000505862 819 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AC098799.3-201ENST00000506095 438 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 AC010285.3-201ENST00000511668 676 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 MRPS36P3-201ENST00000519284 130 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HPS3Q969F9 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
HPS3Q969F9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.71□□□□□ -1.5
HPS3Q969F9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HPS3Q969F9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.71□□□□□ -1.5
HPS3Q969F9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HPS3Q969F9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HPS3Q969F9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
HPS3Q969F9 AC006042.3-201ENST00000454684 1469 ntBASIC5.71□□□□□ -1.5
HPS3Q969F9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 LRRC37BP1-201ENST00000398851 714 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 MIR937-201ENST00000401271 86 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms