Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
CCDC107Q8WV48 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 DDX18P5-201ENST00000534547 1306 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RNA5SP242-201ENST00000364171 118 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SNORA17A-201ENST00000391185 133 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RPL7P27-201ENST00000403775 720 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL592291.1-201ENST00000403830 352 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL512422.1-201ENST00000407033 553 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 MTCO2P8-201ENST00000412213 658 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 CEACAMP8-201ENST00000413902 580 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC009237.10-201ENST00000414112 510 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 USP9YP21-201ENST00000420603 432 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC073069.1-201ENST00000428657 441 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ELOCP6-201ENST00000429066 328 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RPS7P5-201ENST00000441482 581 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 EXOSC3P1-201ENST00000448649 500 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL009048.1-201ENST00000450437 298 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC244505.3-201ENST00000454598 187 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ELOCP12-201ENST00000458706 328 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RN7SL441P-201ENST00000492388 296 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RPS4XP20-201ENST00000505751 772 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC021146.3-201ENST00000511911 260 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AP001207.2-201ENST00000519490 539 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 OR8I1P-201ENST00000529291 931 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC005868.1-201ENST00000536421 331 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC087897.1-201ENST00000550134 156 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC133552.5-201ENST00000604266 540 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC073387.2-201ENST00000604797 784 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL008729.2-201ENST00000606393 473 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AL355816.2-201ENST00000610049 647 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC023510.2-201ENST00000622162 746 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SNORA17.5-201ENST00000630429 132 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC136428.4-201ENST00000634254 1155 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 AC135068.12-201ENST00000637370 931 ntBASIC4.3□□□□□ -1.72
CCDC107Q8WV48 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC107Q8WV48 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 AP000756.2-201ENST00000624168 2567 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 AC104118.1-201ENST00000607625 1589 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 SNORA67-201ENST00000384423 137 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 SNORA11C-201ENST00000408532 129 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 RN7SKP293-201ENST00000411389 296 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 VN1R51P-201ENST00000411675 945 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 RPL21P108-201ENST00000413857 481 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 BTF3P8-201ENST00000414577 526 ntBASIC4.29□□□□□ -1.72
CCDC107Q8WV48 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC107Q8WV48 SLC35E1P1-201ENST00000419313 864 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms