Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC090281.1-201ENST00000523019 276 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 BRD9P1-201ENST00000529855 560 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AL049844.2-201ENST00000604280 628 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC078899.5-201ENST00000612475 178 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC026368.1-201ENST00000614934 690 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC007546.2-201ENST00000623996 360 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 AC006065.6-201ENST00000625201 545 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 LINC01808-202ENST00000641680 1116 ntBASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CLHC1Q8NHS4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC090229.1-201ENST00000590983 1609 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 MIR448-201ENST00000362131 111 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 RNA5SP22-201ENST00000365393 109 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 GCNT6-201ENST00000379591 934 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 TRGV6-201ENST00000417928 299 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 ARAFP1-201ENST00000422172 605 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 FTH1P6-201ENST00000430768 320 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC092905.1-201ENST00000467527 949 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC022336.1-201ENST00000475510 337 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC093270.2-201ENST00000486157 792 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC011005.3-201ENST00000491624 395 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 MIR4458-201ENST00000578872 75 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 MIR4443-201ENST00000585052 53 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC084373.1-201ENST00000603311 235 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 AC017002.4-201ENST00000604721 1525 ntBASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CLHC1Q8NHS4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC062016.2-201ENST00000420950 676 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 NPM1P26-201ENST00000426339 738 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AP001324.1-201ENST00000428553 399 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 RPL12P3-201ENST00000440080 396 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 YWHAZP2-201ENST00000440317 728 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 RPL23AP43-201ENST00000446445 471 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 CEACAMP6-201ENST00000452007 574 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 RN7SL329P-201ENST00000467740 299 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC010683.1-201ENST00000473673 378 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC011037.1-201ENST00000483964 558 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC083982.1-201ENST00000485679 344 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 NDUFA5P12-201ENST00000503796 343 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AP001960.1-201ENST00000506494 658 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC008694.2-201ENST00000517591 306 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AP001781.1-201ENST00000530977 207 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC008759.1-201ENST00000589783 983 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 BNIP3P32-201ENST00000600015 554 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC005084.1-201ENST00000605160 304 ntBASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLHC1Q8NHS4 AC020763.5-201ENST00000623298 430 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms