Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AL352979.3-201ENST00000553515 247 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AP000346.3-201ENST00000622821 210 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 FAM35DP-201ENST00000323387 2712 ntBASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC112Q8NEF3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AL627171.1-201ENST00000618845 1308 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 RNA5SP322-201ENST00000363617 119 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 RNU1-89P-201ENST00000384592 164 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 SNORD66.1-201ENST00000391230 76 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 OR51A6P-201ENST00000418680 1004 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 NPM1P26-201ENST00000426339 738 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 RPL23AP93-201ENST00000440847 484 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AC114495.1-201ENST00000441274 436 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AC011005.3-201ENST00000491624 395 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AGGF1P3-201ENST00000493675 1213 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 MIR2114-201ENST00000516645 80 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 OR5AN2P-201ENST00000534535 896 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 MIR4675-201ENST00000577898 77 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 AC025946.2-201ENST00000603398 234 ntBASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC112Q8NEF3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 FAM3C2-201ENST00000312214 681 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC079741.1-201ENST00000321498 212 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 GLULP6-201ENST00000399502 913 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 RPS3AP23-201ENST00000401762 784 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 RN7SKP56-201ENST00000410513 331 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 RN7SKP100-201ENST00000411258 284 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AL161631.1-201ENST00000417933 486 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC009480.2-201ENST00000422916 432 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 RPS27AP17-201ENST00000463344 455 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC093267.1-201ENST00000489176 961 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 SOX5P1-201ENST00000524155 1127 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 MIR4697-201ENST00000582977 78 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AL133338.2-201ENST00000604292 736 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 AL023583.1-201ENST00000607518 1143 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 MIR6891-201ENST00000618788 93 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 MIR7702-201ENST00000621931 59 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 LINC01808-202ENST00000641680 1116 ntBASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CCDC112Q8NEF3 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 MFSD8-242ENST00000641690 4199 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 AC013268.2-201ENST00000420753 337 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 GAPDHP49-201ENST00000421421 961 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 IPMKP1-201ENST00000425988 855 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 YWHAZP2-201ENST00000440317 728 ntBASIC4.73□□□□□ -1.65
CCDC112Q8NEF3 TPTE2P3-201ENST00000441562 1189 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms