Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL683826.1-201ENST00000624104 627 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 AC110994.2-201ENST00000635481 492 ntBASIC6□□□□□ -1.45
UBE3DQ7Z6J8 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6□□□□□ -1.45
UBE3DQ7Z6J8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 LINC01613-201ENST00000561476 2780 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 SNORD8-201ENST00000363915 110 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 Y_RNA.529-201ENST00000384586 119 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RNU4-64P-201ENST00000410795 131 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RSU1P3-201ENST00000412878 835 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 BX295541.1-201ENST00000417774 250 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RBMY2KP-201ENST00000418221 992 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RPL7AP51-201ENST00000422016 760 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 OSTCP4-201ENST00000424397 449 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 HSPD1P12-201ENST00000429127 1069 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RPS24P8-201ENST00000431490 402 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 YWHAQP9-201ENST00000445891 512 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL022237.1-201ENST00000446663 358 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RPS18P1-201ENST00000447840 458 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC079448.1-201ENST00000449377 373 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 KF459542.1-201ENST00000450908 553 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC103563.5-201ENST00000455643 364 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 VPS25P1-201ENST00000455691 508 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RN7SL612P-201ENST00000497704 295 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 FTH1P8-201ENST00000498161 514 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC111000.3-201ENST00000508057 576 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RNU6-1281P-201ENST00000516223 105 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 SNORA74.1-201ENST00000516320 180 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL845331.3-202ENST00000562856 261 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC027229.1-201ENST00000583887 253 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC010928.3-201ENST00000587712 541 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 RPL12P25-202ENST00000598100 674 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL162413.1-201ENST00000603198 110 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AP000942.4-201ENST00000604811 241 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC011891.2-201ENST00000604949 397 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL352984.2-201ENST00000611153 546 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 MIR7159-201ENST00000620587 66 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC129778.1-202ENST00000623812 261 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC063952.1-203ENST00000634410 658 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AL591379.1-207ENST00000635982 261 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE3DQ7Z6J8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RNU6-809P-201ENST00000384461 107 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RNU6-1151P-201ENST00000384684 107 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 MIR191-201ENST00000384873 92 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AP003170.5-201ENST00000397185 335 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 PRELID1P1-201ENST00000403549 660 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 RN7SKP222-201ENST00000410651 315 ntBASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE3DQ7Z6J8 SDCBPP2-201ENST00000424643 885 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms