Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 SNORA63.1-201ENST00000362493 131 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 U8.11-201ENST00000384699 133 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 U8.12-201ENST00000384701 133 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AL157884.3-201ENST00000448273 1184 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 U8.18-201ENST00000459285 133 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 RPS4XP15-201ENST00000489210 795 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AC026403.1-201ENST00000518938 295 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 MUC2-202ENST00000613187 4845 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 Z82217.1-201ENST00000625157 8149 ntBASIC6.16□□□□□ -1.42
CCDC141Q6ZP82 OR4A15-201ENST00000314706 1035 ntBASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 AL358472.1-201ENST00000431295 329 ntBASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 RPL29P14-201ENST00000495837 428 ntBASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 AC007991.1-201ENST00000522680 631 ntBASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 AC027176.2-201ENST00000559166 746 ntBASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC141Q6ZP82 AC006042.3-201ENST00000454684 1469 ntBASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC141Q6ZP82 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 EOGT-210ENST00000615922 1931 ntBASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 AL450992.3-201ENST00000413192 568 ntBASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 MIR3936-201ENST00000584304 110 ntBASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 SNORA51-201ENST00000606420 132 ntBASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 FP236240.3-201ENST00000623061 327 ntBASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC141Q6ZP82 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 SNORA73.2-201ENST00000364946 201 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AL161631.1-201ENST00000417933 486 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 RBMY1KP-201ENST00000423480 476 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 RAD23BP3-201ENST00000454157 1152 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 GAPDHP36-201ENST00000480688 918 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AC024220.1-201ENST00000603675 484 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 QTRT1P1-201ENST00000604344 1078 ntBASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC141Q6ZP82 NCOA4P2-201ENST00000340589 1813 ntBASIC6.12□□□□□ -1.43
CCDC141Q6ZP82 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms