Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC007394.1-201ENST00000421941 531 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 BX510359.3-201ENST00000422168 306 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AL133173.1-201ENST00000423458 397 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 HMGB1P45-201ENST00000435986 653 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 MOB1AP2-201ENST00000446060 614 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 H2AFZP5-201ENST00000446960 382 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AL096803.2-201ENST00000450032 677 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 RN7SL447P-201ENST00000494711 245 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 PPM1AP1-201ENST00000502740 1135 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 RN7SKP277-201ENST00000516895 283 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC011611.5-201ENST00000552477 578 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC124068.1-201ENST00000563131 678 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC023824.3-201ENST00000569003 562 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 RN7SL356P-201ENST00000582228 248 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 RPL21P136-201ENST00000605378 396 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AL158211.2-201ENST00000607282 395 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC004825.2-201ENST00000616634 455 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AC012020.1-201ENST00000624541 1728 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 AL132640.2-201ENST00000559968 1698 ntBASIC4.48□□□□□ -1.69
C11orf88Q6PI97 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
C11orf88Q6PI97 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL590763.1-201ENST00000398297 1545 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC018529.3-201ENST00000624212 2254 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 RN7SKP6-201ENST00000364795 319 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AP002784.2-201ENST00000397300 549 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 SNORA11B-201ENST00000408175 129 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 BX664727.1-201ENST00000416024 466 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 BMS1P13-201ENST00000417301 885 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 PSMA2P3-201ENST00000429685 675 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL161722.2-201ENST00000434731 981 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 RPL35AP21-201ENST00000437667 333 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC006335.2-201ENST00000437993 330 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 RPS11P7-201ENST00000442125 465 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 MRPL35P2-201ENST00000448009 511 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 BX842559.2-201ENST00000451418 605 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC079168.1-201ENST00000458741 345 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC092754.1-201ENST00000472975 479 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 COPS8P2-201ENST00000473228 627 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC087385.1-201ENST00000475062 312 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 CBX1P5-201ENST00000475330 559 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 SETP6-201ENST00000479329 568 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC126121.1-201ENST00000482313 553 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 RN7SL184P-201ENST00000488308 297 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC006499.3-201ENST00000506077 748 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC018797.3-201ENST00000513388 1241 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 MTND2P26-201ENST00000528255 1029 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC113192.3-201ENST00000529152 742 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC016180.1-201ENST00000567945 403 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC005255.1-201ENST00000593748 216 ntBASIC4.47□□□□□ -1.69
C11orf88Q6PI97 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.47□□□□□ -1.69
C11orf88Q6PI97 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms