Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.11□□□□□ -1.59
USP41Q3LFD5 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP41Q3LFD5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.11□□□□□ -1.59
USP41Q3LFD5 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.11□□□□□ -1.59
USP41Q3LFD5 CASC19-261ENST00000641853 1638 ntBASIC5.11□□□□□ -1.59
USP41Q3LFD5 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP41Q3LFD5 AC008079.2-201ENST00000623543 20396 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP41Q3LFD5 RNU6-481P-201ENST00000384194 107 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC010385.1-201ENST00000412374 256 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL445183.3-201ENST00000414168 502 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL158825.1-201ENST00000414735 521 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 MTCO1P43-201ENST00000431831 488 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC092162.1-201ENST00000432828 434 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC092447.2-201ENST00000435487 669 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC069540.1-201ENST00000446320 988 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC093166.2-201ENST00000455969 1017 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC025459.1-201ENST00000504072 156 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC091868.1-201ENST00000508746 304 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 MTND1P6-201ENST00000523621 946 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 MIR4715-201ENST00000584117 79 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
USP41Q3LFD5 BNIP3P40-201ENST00000596017 556 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL606537.1-201ENST00000607258 2011 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AP004607.9-201ENST00000618202 316 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AP000648.2-201ENST00000624182 404 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 AL121950.1-201ENST00000624993 2077 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP41Q3LFD5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
USP41Q3LFD5 AP001273.1-201ENST00000624493 3152 ntBASIC5.1□□□□□ -1.59
USP41Q3LFD5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP41Q3LFD5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP41Q3LFD5 VPS35P1-201ENST00000563400 1518 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC008432.1-201ENST00000615912 1320 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AL024507.1-201ENST00000412741 274 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC013429.2-201ENST00000418798 781 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AL645608.4-201ENST00000423619 154 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC013262.1-201ENST00000426710 252 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 RPL23AP1-201ENST00000428990 471 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AL451139.1-201ENST00000434718 346 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 CACYBPP1-201ENST00000438592 684 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 RPL6P5-201ENST00000445678 828 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 RPS23P7-201ENST00000466210 444 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 ARL4AP1-201ENST00000503220 705 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 HMGB3P16-201ENST00000508037 287 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 PRELID3BP5-201ENST00000508612 460 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 SNORA31.13-201ENST00000516624 135 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 RNU6-709P-201ENST00000517257 104 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 IGKV2D-10-201ENST00000520194 281 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC138701.1-201ENST00000524329 714 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC008759.3-201ENST00000613300 508 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC083809.1-201ENST00000615051 472 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC078880.5-201ENST00000617845 421 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 MIR6758-201ENST00000620653 63 ntBASIC5.09□□□□□ -1.59
USP41Q3LFD5 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
USP41Q3LFD5 AC021242.1-201ENST00000507315 2035 ntBASIC5.09□□□□□ -1.6
USP41Q3LFD5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP41Q3LFD5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
USP41Q3LFD5 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP41Q3LFD5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms