Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RFX7Q2KHR2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RFX7Q2KHR2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RFX7Q2KHR2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AL122126.1-201ENST00000546905 1318 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 RPL23AP38-201ENST00000423801 469 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AL356276.2-201ENST00000435919 558 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 SERPINA7P1-201ENST00000443077 631 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 RPS7P7-201ENST00000463499 571 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 RPL7P22-201ENST00000466005 733 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 RPL21P129-201ENST00000491732 478 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC006499.6-201ENST00000511169 607 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC108064.1-201ENST00000513791 460 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AL121834.1-201ENST00000572284 509 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 RN7SL703P-201ENST00000578485 302 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC093227.2-201ENST00000589357 285 ntBASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.15□□□□□ -1.59
RFX7Q2KHR2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AL359837.1-201ENST00000381357 287 ntBASIC5.14□□□□□ -1.59
RFX7Q2KHR2 RNA5SP296-201ENST00000410523 111 ntBASIC5.14□□□□□ -1.59
RFX7Q2KHR2 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 RCC2P2-201ENST00000422174 918 ntBASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 IFITM8P-201ENST00000522529 394 ntBASIC5.14□□□□□ -1.59
RFX7Q2KHR2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.14□□□□□ -1.59
RFX7Q2KHR2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RFX7Q2KHR2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AL133243.3-201ENST00000617415 3004 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 SCN1A-220ENST00000641603 12506 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 RNU1-64P-201ENST00000365443 163 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AL139039.2-201ENST00000407436 479 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AL590806.1-201ENST00000415818 853 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 BMS1P19-201ENST00000433925 393 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AL359073.1-201ENST00000448036 403 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AL132838.2-201ENST00000492041 314 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 PPBPP1-201ENST00000510807 373 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC099522.1-202ENST00000514718 367 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 OR5M7P-201ENST00000526140 972 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC105233.3-201ENST00000531125 744 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC069240.1-201ENST00000548774 375 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AL353600.1-201ENST00000608148 251 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC008785.1-201ENST00000624475 456 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 AC055839.1-201ENST00000634467 498 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 Z95327.2-201ENST00000414579 1873 ntBASIC5.13□□□□□ -1.59
RFX7Q2KHR2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RFX7Q2KHR2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 AC092162.3-201ENST00000624511 1624 ntBASIC5.12□□□□□ -1.59
RFX7Q2KHR2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFX7Q2KHR2 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms