Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 MAPK10-365ENST00000641902 3825 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 C4BPAP1-201ENST00000415474 1893 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 CASC19-205ENST00000641013 1411 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 SNORD116-29-201ENST00000384516 83 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL121977.1-201ENST00000401636 979 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL589994.1-201ENST00000404962 340 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RNU6-985P-201ENST00000410182 104 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RNU2-8P-201ENST00000410727 190 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RPL37P18-201ENST00000411602 243 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC244452.1-201ENST00000413798 141 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 IFNA20P-201ENST00000436840 528 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC239798.3-201ENST00000454459 408 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 MTCO3P10-201ENST00000455912 772 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RPS20P4-201ENST00000461659 355 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC117395.1-201ENST00000487390 403 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 CDH12P2-201ENST00000504393 298 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 SNX5P1-201ENST00000505757 1041 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC146944.3-201ENST00000509969 371 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC108064.1-201ENST00000513791 460 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 Y_RNA.718-201ENST00000517110 102 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AP002404.1-201ENST00000532005 451 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 SCOCP1-201ENST00000554676 349 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL845331.3-202ENST00000562856 261 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC023827.2-201ENST00000566880 1061 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AP003115.1-201ENST00000569849 463 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AP000654.2-201ENST00000605633 586 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL512652.1-201ENST00000619006 500 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL356585.4-201ENST00000623078 1229 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL121949.2-201ENST00000403446 1548 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AP003119.3-201ENST00000566747 4192 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL031985.3-201ENST00000565390 2449 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AL359922.2-201ENST00000581788 3017 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AC024560.2-201ENST00000507981 1497 ntBASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RSPO4Q2I0M5 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
RSPO4Q2I0M5 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
RSPO4Q2I0M5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 OR11H4-201ENST00000315409 1082 ntBASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 Y_RNA.97-201ENST00000363094 102 ntBASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 Y_RNA.197-201ENST00000364004 102 ntBASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 AC117470.1-201ENST00000381974 330 ntBASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 SNORA32.2-201ENST00000384049 122 ntBASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 SNORD3H-201ENST00000384486 214 ntBASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RSPO4Q2I0M5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms