Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC073648.4-201ENST00000442655 781 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC108463.1-201ENST00000450258 347 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL354710.1-201ENST00000453641 246 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 IGLV2-34-201ENST00000490007 283 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 NDUFB5P1-201ENST00000508134 564 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 PCNPP1-201ENST00000552501 511 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL121839.1-201ENST00000556233 1185 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL133338.2-201ENST00000604292 736 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL031666.3-201ENST00000609320 1006 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC018445.2-201ENST00000622987 260 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC000123.2-201ENST00000623124 461 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AL355480.1-201ENST00000629041 99 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC132825.1-201ENST00000463573 2247 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 AC139769.1-204ENST00000472297 1931 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 MFSD8-242ENST00000641690 4199 ntBASIC3.4□□□□□ -1.87
HIST1H1AQ02539 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.4□□□□□ -1.87
HIST1H1AQ02539 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC007685.1-201ENST00000329806 452 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RNU1-15P-201ENST00000353977 144 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MIR298-201ENST00000401212 88 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC092647.1-201ENST00000420654 287 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RPL7P53-201ENST00000421245 739 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 NPM1P48-201ENST00000436002 853 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 GSTA7P-201ENST00000438425 448 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RPL31P44-201ENST00000447680 377 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RPL7P31-201ENST00000450192 724 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RPL7P61-201ENST00000451721 751 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RPS3AP41-201ENST00000462701 778 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AP000926.1-201ENST00000479573 241 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MTND4LP2-201ENST00000502312 285 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC007016.1-201ENST00000512110 244 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 RNU6-943P-201ENST00000516960 98 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AP001922.4-201ENST00000526967 290 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 TOMM20P2-201ENST00000540082 421 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AL360157.1-201ENST00000565962 87 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC091042.1-201ENST00000579213 173 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC015911.5-201ENST00000587076 451 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 HMGB1P50-201ENST00000605814 607 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AP002360.3-201ENST00000607673 710 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AL136964.1-201ENST00000622038 2990 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 LINC01808-202ENST00000641680 1116 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 AC125257.1-201ENST00000560400 2930 ntBASIC3.39□□□□□ -1.87
HIST1H1AQ02539 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.39□□□□□ -1.87
HIST1H1AQ02539 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HIST1H1AQ02539 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms