Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.16□□□□□ -1.74
CX3CL1P78423 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.16□□□□□ -1.74
CX3CL1P78423 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.16□□□□□ -1.74
CX3CL1P78423 BNIP3P38-201ENST00000601117 544 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 IMMP1LP3-201ENST00000604197 224 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 AL392112.1-201ENST00000605115 829 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CL1P78423 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.16□□□□□ -1.74
CX3CL1P78423 MIR6729-201ENST00000618194 65 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 AP001002.2-201ENST00000625137 386 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 CASC19-204ENST00000641001 2055 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CL1P78423 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CL1P78423 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.16□□□□□ -1.74
CX3CL1P78423 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CX3CL1P78423 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CL1P78423 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CL1P78423 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CL1P78423 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CX3CL1P78423 AC021242.1-201ENST00000507315 2035 ntBASIC4.16□□□□□ -1.74
CX3CL1P78423 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CX3CL1P78423 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CX3CL1P78423 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CX3CL1P78423 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CX3CL1P78423 USP9YP4-201ENST00000424401 1745 ntBASIC4.15□□□□□ -1.74
CX3CL1P78423 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CX3CL1P78423 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CX3CL1P78423 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CX3CL1P78423 AC011493.1-201ENST00000596753 1632 ntBASIC4.15□□□□□ -1.74
CX3CL1P78423 AL445437.1-201ENST00000623157 3087 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CX3CL1P78423 RNA5SP223-201ENST00000365174 120 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 SNORA51.12-201ENST00000384448 134 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 MIR16-1-201ENST00000385271 89 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 MTCO2P31-201ENST00000402702 684 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AP002530.1-201ENST00000405705 684 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 MIR1286-201ENST00000408112 78 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 SSR1P2-201ENST00000415208 787 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 RPS3AP37-201ENST00000419176 745 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC012519.1-201ENST00000424588 610 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC108075.1-201ENST00000424692 529 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CL1P78423 ELOCP11-201ENST00000436690 332 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RPS29P10-201ENST00000439197 166 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 ELOCP16-201ENST00000444494 332 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 HMGB3P6-201ENST00000444896 598 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC112492.1-201ENST00000449607 712 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RPS6P2-201ENST00000454208 705 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 PTGES3P5-201ENST00000455109 434 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 Z92846.1-201ENST00000456203 268 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AL591473.1-201ENST00000464297 313 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC020898.1-201ENST00000474167 787 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC069528.1-202ENST00000482888 637 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RPS27P23-201ENST00000487608 251 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RN7SL814P-201ENST00000487715 300 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC024558.1-201ENST00000505008 528 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC118282.2-201ENST00000508739 374 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 RN7SKP265-201ENST00000516448 223 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC023632.1-201ENST00000518463 375 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CL1P78423 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CL1P78423 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AL442163.2-201ENST00000553912 710 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC044913.1-201ENST00000557200 430 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CL1P78423 MIR3176-201ENST00000582210 90 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC110743.1-201ENST00000584870 478 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC008814.1-201ENST00000603797 406 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AL035411.2-201ENST00000604022 421 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CL1P78423 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AP005137.2-201ENST00000609238 400 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 AC100847.1-201ENST00000611316 481 ntBASIC4.15□□□□□ -1.75
CX3CL1P78423 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CL1P78423 AC022106.2-201ENST00000620114 757 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms