Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MIR708-201ENST00000390708 88 ntBASIC2.82□□□□□ -1.96
RPL39P62891 RPL23AP59-201ENST00000399415 461 ntBASIC2.82□□□□□ -1.96
RPL39P62891 P2RY10P2-201ENST00000416730 913 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AL356387.2-201ENST00000422272 243 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AC006065.1-201ENST00000422539 802 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC2.82□□□□□ -1.96
RPL39P62891 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.82□□□□□ -1.96
RPL39P62891 AL358472.1-201ENST00000431295 329 ntBASIC2.82□□□□□ -1.96
RPL39P62891 PPIAP17-201ENST00000438507 471 ntBASIC2.82□□□□□ -1.96
RPL39P62891 RPL12P3-201ENST00000440080 396 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AC092809.1-201ENST00000441469 474 ntBASIC2.82□□□□□ -1.96
RPL39P62891 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC2.82□□□□□ -1.96
RPL39P62891 AL161722.1-201ENST00000446972 1032 ntBASIC2.82□□□□□ -1.96
RPL39P62891 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RPL39P62891 AC004453.1-201ENST00000487895 408 ntBASIC2.82□□□□□ -1.96
RPL39P62891 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC2.82□□□□□ -1.96
RPL39P62891 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC2.82□□□□□ -1.96
RPL39P62891 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC2.82□□□□□ -1.96
RPL39P62891 RNA5SP49-201ENST00000516450 115 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.82□□□□□ -1.96
RPL39P62891 AP001922.4-201ENST00000526967 290 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AP000676.2-201ENST00000529711 301 ntBASIC2.82□□□□□ -1.96
RPL39P62891 BRD9P1-201ENST00000529855 560 ntBASIC2.82□□□□□ -1.96
RPL39P62891 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RPL39P62891 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.82□□□□□ -1.96
RPL39P62891 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RPL39P62891 AC025946.2-201ENST00000603398 234 ntBASIC2.82□□□□□ -1.96
RPL39P62891 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.82□□□□□ -1.96
RPL39P62891 FAM27D1-201ENST00000612308 341 ntBASIC2.82□□□□□ -1.96
RPL39P62891 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.82□□□□□ -1.96
RPL39P62891 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.82□□□□□ -1.96
RPL39P62891 AC241377.1-201ENST00000619797 406 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC2.82□□□□□ -1.96
RPL39P62891 AC124312.6-202ENST00000623624 418 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AC021106.3-201ENST00000623925 531 ntBASIC2.82□□□□□ -1.96
RPL39P62891 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.82□□□□□ -1.96
RPL39P62891 AC233968.1-201ENST00000611212 1300 ntBASIC2.82□□□□□ -1.96
RPL39P62891 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
RPL39P62891 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RPL39P62891 AL592148.3-201ENST00000608771 2646 ntBASIC2.82□□□□□ -1.96
RPL39P62891 EIF2AP4-201ENST00000424793 1781 ntBASIC2.82□□□□□ -1.96
RPL39P62891 ALB-214ENST00000509063 1911 ntTSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 PROS2P-201ENST00000474651 1951 ntBASIC2.81□□□□□ -1.96
RPL39P62891 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
RPL39P62891 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPL39P62891 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPL39P62891 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPL39P62891 AL645927.1-201ENST00000396783 406 ntBASIC2.81□□□□□ -1.96
RPL39P62891 ATP5F1P4-201ENST00000397288 746 ntBASIC2.81□□□□□ -1.96
RPL39P62891 OR51A6P-201ENST00000418680 1004 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AC092570.3-201ENST00000420113 693 ntBASIC2.81□□□□□ -1.96
RPL39P62891 CHIAP3-201ENST00000423668 1133 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AL359265.2-201ENST00000434367 631 ntBASIC2.81□□□□□ -1.96
RPL39P62891 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.81□□□□□ -1.96
RPL39P62891 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 AC073648.4-201ENST00000442655 781 ntBASIC2.81□□□□□ -1.96
RPL39P62891 PPIAP20-201ENST00000449839 135 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AC239809.1-201ENST00000450470 217 ntBASIC2.81□□□□□ -1.96
RPL39P62891 RN7SL98P-201ENST00000462271 300 ntBASIC2.81□□□□□ -1.96
RPL39P62891 RN7SL271P-201ENST00000487601 295 ntBASIC2.81□□□□□ -1.96
RPL39P62891 RPL7P24-201ENST00000493052 752 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.81□□□□□ -1.96
RPL39P62891 KCTD9P2-201ENST00000512203 1013 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC2.81□□□□□ -1.96
RPL39P62891 IGHVIII-67-4-201ENST00000524281 296 ntBASIC2.81□□□□□ -1.96
RPL39P62891 TRAV8-5-201ENST00000537369 341 ntBASIC2.81□□□□□ -1.96
RPL39P62891 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
RPL39P62891 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC2.81□□□□□ -1.96
RPL39P62891 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC2.81□□□□□ -1.96
RPL39P62891 AL133457.1-201ENST00000564251 987 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AC025627.2-201ENST00000576220 160 ntBASIC2.81□□□□□ -1.96
RPL39P62891 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
RPL39P62891 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC2.81□□□□□ -1.96
RPL39P62891 BRDTP1-201ENST00000605735 677 ntBASIC2.81□□□□□ -1.96
RPL39P62891 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 AL445528.2-201ENST00000620582 470 ntBASIC2.81□□□□□ -1.96
RPL39P62891 AC002044.3-201ENST00000623314 541 ntBASIC2.81□□□□□ -1.96
RPL39P62891 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC2.81□□□□□ -1.96
RPL39P62891 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPL39P62891 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RPL39P62891 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RPL39P62891 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
RPL39P62891 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPL39P62891 HSPA8P1-201ENST00000425843 1833 ntBASIC2.8□□□□□ -1.96
RPL39P62891 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPL39P62891 DHX40P1-201ENST00000588725 1412 ntBASIC2.8□□□□□ -1.96
RPL39P62891 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPL39P62891 OR4K15-201ENST00000305051 1216 ntBASIC2.8□□□□□ -1.96
RPL39P62891 MIR423-201ENST00000362201 94 ntBASIC2.8□□□□□ -1.96
RPL39P62891 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPL39P62891 RNU2-50P-201ENST00000410494 143 ntBASIC2.8□□□□□ -1.96
RPL39P62891 RPL37P18-201ENST00000411602 243 ntBASIC2.8□□□□□ -1.96
RPL39P62891 AMD1P2-201ENST00000412936 992 ntBASIC2.8□□□□□ -1.96
RPL39P62891 AC010740.1-201ENST00000417035 684 ntBASIC2.8□□□□□ -1.96
RPL39P62891 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC2.8□□□□□ -1.96
RPL39P62891 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC2.8□□□□□ -1.96
RPL39P62891 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms