Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL672167.2-201ENST00000377164 879 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 COX6CP15-201ENST00000426313 211 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 AC073335.1-201ENST00000427776 363 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 SKP1P3-201ENST00000429280 487 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 PSMC1P13-201ENST00000458195 985 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 AC079804.1-201ENST00000461922 436 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 RPL7P19-201ENST00000469948 618 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 RPS27AP13-201ENST00000498403 237 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.54□□□□□ -1.52
RIPK4P57078 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 AC021733.2-201ENST00000518830 497 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.54□□□□□ -1.52
RIPK4P57078 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.54□□□□□ -1.52
RIPK4P57078 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RIPK4P57078 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RIPK4P57078 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK4P57078 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK4P57078 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
RIPK4P57078 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK4P57078 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.53□□□□□ -1.52
RIPK4P57078 SNORA70C-201ENST00000384538 135 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 EIF4EP1-201ENST00000422311 642 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 RBMY1KP-201ENST00000423480 476 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 ELOCP3-201ENST00000439303 348 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RIPK4P57078 AF213884.1-201ENST00000488102 463 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 AC008694.2-201ENST00000517591 306 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 IGLV3-26-201ENST00000520756 302 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RIPK4P57078 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK4P57078 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK4P57078 AC023509.5-201ENST00000617434 807 ntBASIC5.53□□□□□ -1.52
RIPK4P57078 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.53□□□□□ -1.52
RIPK4P57078 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RIPK4P57078 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RIPK4P57078 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RIPK4P57078 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.52□□□□□ -1.53
RIPK4P57078 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.52□□□□□ -1.53
RIPK4P57078 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 AC004975.1-201ENST00000428733 208 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 NUTF2P7-201ENST00000453086 375 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 BNIP3P41-201ENST00000503774 571 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 IGBP1P5-201ENST00000507524 1000 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.52□□□□□ -1.53
RIPK4P57078 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 RNU6-964P-201ENST00000516524 69 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.52□□□□□ -1.53
RIPK4P57078 AC105233.3-201ENST00000531125 744 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.52□□□□□ -1.53
RIPK4P57078 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.52□□□□□ -1.53
RIPK4P57078 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.52□□□□□ -1.53
RIPK4P57078 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.52□□□□□ -1.53
RIPK4P57078 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.52□□□□□ -1.53
RIPK4P57078 AC067931.1-201ENST00000624190 671 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.52□□□□□ -1.53
RIPK4P57078 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RIPK4P57078 AC105074.1-201ENST00000623380 3095 ntBASIC5.52□□□□□ -1.53
RIPK4P57078 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RIPK4P57078 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RIPK4P57078 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RIPK4P57078 HCFC2P1-201ENST00000392864 1592 ntBASIC5.51□□□□□ -1.53
RIPK4P57078 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIPK4P57078 VDAC2P1-201ENST00000399358 958 ntBASIC5.51□□□□□ -1.53
RIPK4P57078 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.51□□□□□ -1.53
RIPK4P57078 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.51□□□□□ -1.53
RIPK4P57078 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.51□□□□□ -1.53
RIPK4P57078 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.51□□□□□ -1.53
RIPK4P57078 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.51□□□□□ -1.53
RIPK4P57078 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.51□□□□□ -1.53
RIPK4P57078 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.51□□□□□ -1.53
RIPK4P57078 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.51□□□□□ -1.53
RIPK4P57078 AL591034.3-201ENST00000605511 685 ntBASIC5.51□□□□□ -1.53
RIPK4P57078 AL731566.2-201ENST00000618971 317 ntBASIC5.51□□□□□ -1.53
RIPK4P57078 MIR492-201ENST00000638676 116 ntBASIC5.51□□□□□ -1.53
RIPK4P57078 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.51□□□□□ -1.53
RIPK4P57078 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIPK4P57078 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIPK4P57078 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RIPK4P57078 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
RIPK4P57078 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.5□□□□□ -1.53
RIPK4P57078 OR4G1P-202ENST00000641173 1788 ntBASIC5.5□□□□□ -1.53
RIPK4P57078 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIPK4P57078 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RIPK4P57078 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.5□□□□□ -1.53
RIPK4P57078 RPS26P8-201ENST00000393490 348 ntBASIC5.5□□□□□ -1.53
RIPK4P57078 FABP12P1-201ENST00000401911 322 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms