Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC005868.1-201ENST00000536421 331 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 BNIP3P1-201ENST00000547295 580 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.15□□□□□ -1.59
HDAC4P56524 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.15□□□□□ -1.59
HDAC4P56524 AC011492.1-201ENST00000600023 315 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC087763.1-201ENST00000603391 286 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC079610.2-201ENST00000604818 690 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 Mico1.1-201ENST00000611698 204 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 AC099654.9-201ENST00000637055 678 ntBASIC5.15□□□□□ -1.59
HDAC4P56524 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.15□□□□□ -1.59
HDAC4P56524 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.15□□□□□ -1.59
HDAC4P56524 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HDAC4P56524 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HDAC4P56524 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HDAC4P56524 HSPD1P11-201ENST00000508643 1702 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HDAC4P56524 NCSTNP1-201ENST00000406229 144 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC010385.1-201ENST00000412374 256 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 AC105402.1-201ENST00000413336 545 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC004690.1-201ENST00000418216 328 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC008173.1-201ENST00000418901 264 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 RPL7P11-201ENST00000437586 658 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 AC044797.1-201ENST00000445744 679 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC000111.2-201ENST00000448200 210 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 HMGB1P26-201ENST00000452520 628 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 RN7SL319P-201ENST00000480656 221 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 RN7SL97P-201ENST00000486780 299 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 HMGB1P38-201ENST00000490557 577 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 RNU6-1004P-201ENST00000516584 111 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC010476.1-201ENST00000519111 851 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 OR5D15P-201ENST00000531671 942 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC4P56524 AC087894.1-201ENST00000538359 518 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.14□□□□□ -1.59
HDAC4P56524 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.14□□□□□ -1.59
HDAC4P56524 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC4P56524 AC068714.1-201ENST00000559623 800 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 TVP23CP2-201ENST00000571473 623 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AP005119.2-201ENST00000579735 1105 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.14□□□□□ -1.59
HDAC4P56524 AL049539.1-201ENST00000611964 459 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 RMST_10.1-201ENST00000616309 154 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC084824.4-201ENST00000620106 731 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 AC022106.2-201ENST00000620114 757 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.14□□□□□ -1.59
HDAC4P56524 AC092079.1-201ENST00000558620 1985 ntBASIC5.14□□□□□ -1.59
HDAC4P56524 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HDAC4P56524 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HDAC4P56524 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.14□□□□□ -1.59
HDAC4P56524 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC4P56524 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 LINC01355-201ENST00000566551 5444 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 RN7SKP104-201ENST00000362605 328 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 RN7SKP95-201ENST00000362860 303 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HDAC4P56524 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 AP002784.2-201ENST00000397300 549 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HDAC4P56524 Z97832.1-201ENST00000402490 328 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AL357515.1-201ENST00000402967 542 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC4P56524 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.13□□□□□ -1.59
HDAC4P56524 CYCSP10-201ENST00000417973 294 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 RBMY2KP-201ENST00000418221 992 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 OR2AH1P-201ENST00000425717 928 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 MTCO3P21-201ENST00000430791 643 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC093414.1-201ENST00000434712 514 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 PSMD10P3-201ENST00000437000 448 ntBASIC5.13□□□□□ -1.59
HDAC4P56524 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.13□□□□□ -1.59
HDAC4P56524 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.13□□□□□ -1.59
HDAC4P56524 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.13□□□□□ -1.59
HDAC4P56524 RN7SL517P-201ENST00000462240 305 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms