Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.97□□□□□ -1.61
VCPP55072 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.97□□□□□ -1.61
VCPP55072 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VCPP55072 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.97□□□□□ -1.61
VCPP55072 SNORA31.9-201ENST00000516429 84 ntBASIC4.97□□□□□ -1.61
VCPP55072 AF186190.1-201ENST00000517470 480 ntBASIC4.97□□□□□ -1.61
VCPP55072 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VCPP55072 FKBP1BP1-201ENST00000553366 325 ntBASIC4.97□□□□□ -1.61
VCPP55072 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.97□□□□□ -1.61
VCPP55072 AC093249.4-201ENST00000564755 259 ntBASIC4.97□□□□□ -1.61
VCPP55072 MIR4444-1-201ENST00000581696 74 ntBASIC4.97□□□□□ -1.61
VCPP55072 MIR4444-2-201ENST00000584390 74 ntBASIC4.97□□□□□ -1.61
VCPP55072 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.97□□□□□ -1.61
VCPP55072 SNX6P1-201ENST00000601728 1224 ntBASIC4.97□□□□□ -1.61
VCPP55072 AC024220.1-201ENST00000603675 484 ntBASIC4.97□□□□□ -1.61
VCPP55072 AL391597.1-201ENST00000618707 694 ntBASIC4.97□□□□□ -1.61
VCPP55072 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.97□□□□□ -1.61
VCPP55072 AC112200.1-201ENST00000625015 234 ntBASIC4.97□□□□□ -1.61
VCPP55072 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VCPP55072 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.97□□□□□ -1.61
VCPP55072 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
VCPP55072 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VCPP55072 UGT2B26P-201ENST00000508672 1613 ntBASIC4.97□□□□□ -1.61
VCPP55072 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VCPP55072 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VCPP55072 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VCPP55072 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.97□□□□□ -1.61
VCPP55072 AL121950.1-201ENST00000624993 2077 ntBASIC4.96□□□□□ -1.61
VCPP55072 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.96□□□□□ -1.61
VCPP55072 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VCPP55072 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VCPP55072 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VCPP55072 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VCPP55072 RNU1-94P-201ENST00000362627 173 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.96□□□□□ -1.62
VCPP55072 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 RCC2P2-201ENST00000422174 918 ntBASIC4.96□□□□□ -1.62
VCPP55072 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 OR4C10P-201ENST00000434991 931 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC097523.2-201ENST00000435551 652 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VCPP55072 AC114755.5-201ENST00000447760 831 ntBASIC4.96□□□□□ -1.62
VCPP55072 RAB28P3-201ENST00000448325 597 ntBASIC4.96□□□□□ -1.62
VCPP55072 NUTF2P3-201ENST00000448540 384 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC069277.2-201ENST00000454211 432 ntBASIC4.96□□□□□ -1.62
VCPP55072 HMGN1P8-201ENST00000463578 288 ntBASIC4.96□□□□□ -1.62
VCPP55072 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AC022336.1-201ENST00000475510 337 ntBASIC4.96□□□□□ -1.62
VCPP55072 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.96□□□□□ -1.62
VCPP55072 MTCO1P49-201ENST00000523429 802 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AP000889.1-201ENST00000530968 660 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AL049874.4-201ENST00000557593 255 ntBASIC4.96□□□□□ -1.62
VCPP55072 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.96□□□□□ -1.62
VCPP55072 RN7SL802P-201ENST00000577858 299 ntBASIC4.96□□□□□ -1.62
VCPP55072 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.96□□□□□ -1.62
VCPP55072 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.96□□□□□ -1.62
VCPP55072 AL121932.1-201ENST00000605542 214 ntBASIC4.96□□□□□ -1.62
VCPP55072 CR381572.2-201ENST00000624852 397 ntBASIC4.96□□□□□ -1.62
VCPP55072 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
VCPP55072 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VCPP55072 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VCPP55072 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.95□□□□□ -1.62
VCPP55072 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
VCPP55072 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.95□□□□□ -1.62
VCPP55072 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 AL442639.1-201ENST00000625030 1899 ntBASIC4.95□□□□□ -1.62
VCPP55072 RNU4-23P-201ENST00000362839 140 ntBASIC4.95□□□□□ -1.62
VCPP55072 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.95□□□□□ -1.62
VCPP55072 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
VCPP55072 ATG4AP1-201ENST00000416893 538 ntBASIC4.95□□□□□ -1.62
VCPP55072 AC244453.4-201ENST00000419150 388 ntBASIC4.95□□□□□ -1.62
VCPP55072 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.95□□□□□ -1.62
VCPP55072 AL645608.4-201ENST00000423619 154 ntBASIC4.95□□□□□ -1.62
VCPP55072 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.95□□□□□ -1.62
VCPP55072 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 PHBP16-201ENST00000446318 950 ntBASIC4.95□□□□□ -1.62
VCPP55072 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 AC104651.2-201ENST00000447549 528 ntBASIC4.95□□□□□ -1.62
VCPP55072 RPL23AP24-201ENST00000458203 385 ntBASIC4.95□□□□□ -1.62
VCPP55072 RPL7P19-201ENST00000469948 618 ntBASIC4.95□□□□□ -1.62
VCPP55072 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
VCPP55072 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 AC104971.1-201ENST00000495117 578 ntBASIC4.95□□□□□ -1.62
VCPP55072 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VCPP55072 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.95□□□□□ -1.62
VCPP55072 MRPL49P2-201ENST00000521066 465 ntBASIC4.95□□□□□ -1.62
VCPP55072 OR4A2P-201ENST00000527276 913 ntBASIC4.95□□□□□ -1.62
VCPP55072 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.95□□□□□ -1.62
VCPP55072 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.95□□□□□ -1.62
VCPP55072 OR8X1P-201ENST00000534542 869 ntBASIC4.95□□□□□ -1.62
VCPP55072 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
VCPP55072 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.95□□□□□ -1.62
VCPP55072 AC084783.1-201ENST00000565846 910 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms