Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPAP53621 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPAP53621 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
COPAP53621 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COPAP53621 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COPAP53621 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COPAP53621 AC023421.1-201ENST00000590535 1785 ntBASIC5.4□□□□□ -1.54
COPAP53621 RNU6-1339P-201ENST00000363574 91 ntBASIC5.4□□□□□ -1.54
COPAP53621 SNORD56.6-201ENST00000384569 71 ntBASIC5.4□□□□□ -1.54
COPAP53621 SNORA48.4-201ENST00000391089 134 ntBASIC5.4□□□□□ -1.54
COPAP53621 DBIP1-201ENST00000401435 260 ntBASIC5.4□□□□□ -1.54
COPAP53621 MTCO1P56-201ENST00000401674 224 ntBASIC5.4□□□□□ -1.54
COPAP53621 RPL22P18-201ENST00000417197 377 ntBASIC5.4□□□□□ -1.54
COPAP53621 MTCO3P21-201ENST00000430791 643 ntBASIC5.4□□□□□ -1.54
COPAP53621 VN1R54P-201ENST00000435210 1049 ntBASIC5.4□□□□□ -1.54
COPAP53621 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.4□□□□□ -1.54
COPAP53621 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.4□□□□□ -1.54
COPAP53621 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.4□□□□□ -1.54
COPAP53621 AC016772.1-201ENST00000444170 1261 ntBASIC5.4□□□□□ -1.54
COPAP53621 MTCYBP42-201ENST00000444653 1130 ntBASIC5.4□□□□□ -1.54
COPAP53621 AL645937.3-201ENST00000453647 936 ntBASIC5.4□□□□□ -1.54
COPAP53621 PPIAP21-201ENST00000464473 501 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC092754.1-201ENST00000472975 479 ntBASIC5.4□□□□□ -1.54
COPAP53621 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPAP53621 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPAP53621 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 HPRT1P2-201ENST00000505250 544 ntBASIC5.4□□□□□ -1.54
COPAP53621 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.4□□□□□ -1.54
COPAP53621 AC002456.2-201ENST00000509356 380 ntBASIC5.4□□□□□ -1.54
COPAP53621 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COPAP53621 AC016559.2-201ENST00000510759 359 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC092709.1-201ENST00000521355 1045 ntBASIC5.4□□□□□ -1.54
COPAP53621 DEFB130C-202ENST00000530001 230 ntBASIC5.4□□□□□ -1.54
COPAP53621 LSM3P2-201ENST00000551246 273 ntBASIC5.4□□□□□ -1.54
COPAP53621 MRPS36P5-201ENST00000551909 298 ntBASIC5.4□□□□□ -1.54
COPAP53621 SETP1-201ENST00000556014 845 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC040958.1-201ENST00000561102 201 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 MTCYBP13-201ENST00000578634 1093 ntBASIC5.4□□□□□ -1.54
COPAP53621 MIR4646-201ENST00000580775 63 ntBASIC5.4□□□□□ -1.54
COPAP53621 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
COPAP53621 CCDC58P3-201ENST00000590792 430 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 AC116651.1-201ENST00000609724 556 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC097478.2-201ENST00000610572 514 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC021755.4-201ENST00000616620 456 ntBASIC5.4□□□□□ -1.54
COPAP53621 U6.48-201ENST00000618523 106 ntBASIC5.4□□□□□ -1.54
COPAP53621 AP002791.1-201ENST00000623291 381 ntBASIC5.4□□□□□ -1.54
COPAP53621 AC120349.3-201ENST00000624377 529 ntBASIC5.4□□□□□ -1.54
COPAP53621 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.4□□□□□ -1.54
COPAP53621 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COPAP53621 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COPAP53621 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPAP53621 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPAP53621 AC008079.2-201ENST00000623543 20396 ntBASIC5.4□□□□□ -1.55
COPAP53621 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPAP53621 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
COPAP53621 MAPK10-304ENST00000641341 3984 ntBASIC5.4□□□□□ -1.55
COPAP53621 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 AC114947.2-201ENST00000565748 2125 ntBASIC5.39□□□□□ -1.55
COPAP53621 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 AC131971.1-201ENST00000332881 1482 ntBASIC5.39□□□□□ -1.55
COPAP53621 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COPAP53621 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
COPAP53621 AC100757.1-201ENST00000616872 1835 ntBASIC5.39□□□□□ -1.55
COPAP53621 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COPAP53621 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
COPAP53621 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 AC103591.2-201ENST00000265259 766 ntBASIC5.39□□□□□ -1.55
COPAP53621 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 RNU4-28P-201ENST00000364739 141 ntBASIC5.39□□□□□ -1.55
COPAP53621 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COPAP53621 Y_RNA.472-201ENST00000384322 102 ntBASIC5.39□□□□□ -1.55
COPAP53621 MIR513B-201ENST00000385136 84 ntBASIC5.39□□□□□ -1.55
COPAP53621 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
COPAP53621 RNU6-603P-201ENST00000411403 107 ntBASIC5.39□□□□□ -1.55
COPAP53621 SETP15-201ENST00000412724 337 ntBASIC5.39□□□□□ -1.55
COPAP53621 C1DP1-201ENST00000426049 402 ntBASIC5.39□□□□□ -1.55
COPAP53621 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.39□□□□□ -1.55
COPAP53621 HSPD1P12-201ENST00000429127 1069 ntBASIC5.39□□□□□ -1.55
COPAP53621 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.39□□□□□ -1.55
COPAP53621 AL929288.2-201ENST00000446368 407 ntBASIC5.39□□□□□ -1.55
COPAP53621 AL589880.1-201ENST00000448271 287 ntBASIC5.39□□□□□ -1.55
COPAP53621 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.39□□□□□ -1.55
COPAP53621 PRPF38AP1-201ENST00000451976 933 ntBASIC5.39□□□□□ -1.55
COPAP53621 AC104634.1-201ENST00000452720 462 ntBASIC5.39□□□□□ -1.55
COPAP53621 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.39□□□□□ -1.55
COPAP53621 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.39□□□□□ -1.55
COPAP53621 RPL35AP28-201ENST00000459730 331 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms