Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NUP98P52948 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP98P52948 AC005255.1-201ENST00000593748 216 ntBASIC5.07□□□□□ -1.6
NUP98P52948 BNIP3P33-201ENST00000598912 569 ntBASIC5.07□□□□□ -1.6
NUP98P52948 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 AC064801.1-201ENST00000612025 407 ntBASIC5.07□□□□□ -1.6
NUP98P52948 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 AC090246.1-201ENST00000616499 426 ntBASIC5.07□□□□□ -1.6
NUP98P52948 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP98P52948 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NUP98P52948 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.07□□□□□ -1.6
NUP98P52948 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 AC012417.1-201ENST00000582307 1039 ntBASIC5.07□□□□□ -1.6
NUP98P52948 AC107993.1-201ENST00000591343 684 ntBASIC5.07□□□□□ -1.6
NUP98P52948 AC112230.1-201ENST00000604342 547 ntBASIC5.07□□□□□ -1.6
NUP98P52948 AL451086.1-201ENST00000605596 223 ntBASIC5.07□□□□□ -1.6
NUP98P52948 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.07□□□□□ -1.6
NUP98P52948 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.07□□□□□ -1.6
NUP98P52948 AP005264.7-201ENST00000625003 745 ntBASIC5.07□□□□□ -1.6
NUP98P52948 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP98P52948 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
NUP98P52948 AC021242.1-201ENST00000507315 2035 ntBASIC5.06□□□□□ -1.6
NUP98P52948 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP98P52948 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 AC106871.1-201ENST00000568324 3102 ntBASIC5.06□□□□□ -1.6
NUP98P52948 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP98P52948 ZNF285B-201ENST00000561698 1767 ntBASIC5.06□□□□□ -1.6
NUP98P52948 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.06□□□□□ -1.6
NUP98P52948 AL590704.1-201ENST00000402856 794 ntBASIC5.06□□□□□ -1.6
NUP98P52948 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.06□□□□□ -1.6
NUP98P52948 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP98P52948 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP98P52948 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.06□□□□□ -1.6
NUP98P52948 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.06□□□□□ -1.6
NUP98P52948 AC103968.1-201ENST00000557841 573 ntBASIC5.06□□□□□ -1.6
NUP98P52948 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.06□□□□□ -1.6
NUP98P52948 MIR6868-201ENST00000611215 58 ntBASIC5.06□□□□□ -1.6
NUP98P52948 AC015967.1-201ENST00000619893 476 ntBASIC5.06□□□□□ -1.6
NUP98P52948 CR392039.5-201ENST00000623201 510 ntBASIC5.06□□□□□ -1.6
NUP98P52948 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NUP98P52948 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NUP98P52948 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 SNORA60-201ENST00000362396 134 ntBASIC5.05□□□□□ -1.6
NUP98P52948 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP98P52948 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 AC012158.1-204ENST00000483430 465 ntBASIC5.05□□□□□ -1.6
NUP98P52948 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.05□□□□□ -1.6
NUP98P52948 SCARNA14-201ENST00000516903 136 ntBASIC5.05□□□□□ -1.6
NUP98P52948 IGKV2D-19-201ENST00000523346 262 ntBASIC5.05□□□□□ -1.6
NUP98P52948 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.05□□□□□ -1.6
NUP98P52948 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP98P52948 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.05□□□□□ -1.6
NUP98P52948 AL031666.3-201ENST00000609320 1006 ntBASIC5.05□□□□□ -1.6
NUP98P52948 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.05□□□□□ -1.6
NUP98P52948 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NUP98P52948 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NUP98P52948 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP98P52948 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP98P52948 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.04□□□□□ -1.6
NUP98P52948 AL139099.1-201ENST00000497398 403 ntBASIC5.04□□□□□ -1.6
NUP98P52948 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP98P52948 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.04□□□□□ -1.6
NUP98P52948 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP98P52948 RPL21P7-201ENST00000557463 483 ntBASIC5.04□□□□□ -1.6
NUP98P52948 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP98P52948 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.04□□□□□ -1.6
NUP98P52948 AC138907.10-201ENST00000623708 983 ntBASIC5.04□□□□□ -1.6
NUP98P52948 AP003400.2-201ENST00000624036 666 ntBASIC5.04□□□□□ -1.6
NUP98P52948 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.04□□□□□ -1.6
NUP98P52948 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP98P52948 AC007998.4-201ENST00000612496 2533 ntBASIC5.04□□□□□ -1.6
NUP98P52948 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NUP98P52948 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NUP98P52948 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NUP98P52948 MIR670-201ENST00000390142 98 ntBASIC5.04□□□□□ -1.6
NUP98P52948 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms