Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 NMNAT1P2-201ENST00000435192 860 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AC104978.1-201ENST00000449387 391 ntBASIC5.93□□□□□ -1.46
MSH6P52701 RNU6-513P-201ENST00000516104 104 ntBASIC5.93□□□□□ -1.46
MSH6P52701 RPL21P12-201ENST00000559810 515 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AC005255.1-201ENST00000593748 216 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 AC015967.1-201ENST00000619893 476 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.93□□□□□ -1.46
MSH6P52701 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
MSH6P52701 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MSH6P52701 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MSH6P52701 AP001284.1-201ENST00000528393 2118 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AC007529.1-201ENST00000418574 2178 ntBASIC5.93□□□□□ -1.46
MSH6P52701 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 AC000374.1-201ENST00000434698 1745 ntBASIC5.93□□□□□ -1.46
MSH6P52701 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
MSH6P52701 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
MSH6P52701 AL080315.1-201ENST00000406055 466 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AL691449.1-201ENST00000426570 421 ntBASIC5.93□□□□□ -1.46
MSH6P52701 CDY14P-201ENST00000431260 1014 ntBASIC5.93□□□□□ -1.46
MSH6P52701 CYCSP43-201ENST00000438233 310 ntBASIC5.93□□□□□ -1.46
MSH6P52701 CDY12P-201ENST00000440679 1015 ntBASIC5.93□□□□□ -1.46
MSH6P52701 CDY13P-201ENST00000445813 1015 ntBASIC5.93□□□□□ -1.46
MSH6P52701 CDY23P-201ENST00000451661 1014 ntBASIC5.93□□□□□ -1.46
MSH6P52701 RPL35AP15-201ENST00000468042 339 ntBASIC5.93□□□□□ -1.46
MSH6P52701 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MSH6P52701 AC026427.2-201ENST00000506228 536 ntBASIC5.93□□□□□ -1.46
MSH6P52701 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.93□□□□□ -1.46
MSH6P52701 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.93□□□□□ -1.46
MSH6P52701 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.93□□□□□ -1.46
MSH6P52701 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.93□□□□□ -1.46
MSH6P52701 AC130352.1-201ENST00000602979 661 ntBASIC5.93□□□□□ -1.46
MSH6P52701 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
MSH6P52701 FP325313.1-201ENST00000638228 703 ntBASIC5.93□□□□□ -1.46
MSH6P52701 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
MSH6P52701 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.92□□□□□ -1.46
MSH6P52701 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MSH6P52701 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MSH6P52701 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MSH6P52701 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MSH6P52701 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.92□□□□□ -1.46
MSH6P52701 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
MSH6P52701 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
MSH6P52701 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.92□□□□□ -1.46
MSH6P52701 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
MSH6P52701 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
MSH6P52701 AC092647.1-201ENST00000420654 287 ntBASIC5.92□□□□□ -1.46
MSH6P52701 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.92□□□□□ -1.46
MSH6P52701 RPS26P4-201ENST00000431743 355 ntBASIC5.92□□□□□ -1.46
MSH6P52701 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.92□□□□□ -1.46
MSH6P52701 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
MSH6P52701 CAB39P1-201ENST00000502277 460 ntBASIC5.92□□□□□ -1.46
MSH6P52701 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.92□□□□□ -1.46
MSH6P52701 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.92□□□□□ -1.46
MSH6P52701 AC093524.1-201ENST00000564266 1094 ntBASIC5.92□□□□□ -1.46
MSH6P52701 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.92□□□□□ -1.46
MSH6P52701 AC011471.1-201ENST00000585766 187 ntBASIC5.92□□□□□ -1.46
MSH6P52701 MIR7151-201ENST00000617477 60 ntBASIC5.92□□□□□ -1.46
MSH6P52701 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
MSH6P52701 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
MSH6P52701 USP9YP4-201ENST00000424401 1745 ntBASIC5.91□□□□□ -1.46
MSH6P52701 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.91□□□□□ -1.46
MSH6P52701 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
MSH6P52701 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSH6P52701 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MSH6P52701 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
MSH6P52701 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
MSH6P52701 RNU1-20P-201ENST00000363314 162 ntBASIC5.91□□□□□ -1.46
MSH6P52701 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSH6P52701 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.91□□□□□ -1.46
MSH6P52701 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 RPL36AP10-201ENST00000421785 322 ntBASIC5.91□□□□□ -1.46
MSH6P52701 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 Z74021.1-201ENST00000423610 407 ntBASIC5.91□□□□□ -1.46
MSH6P52701 RPL12P18-201ENST00000437175 325 ntBASIC5.91□□□□□ -1.46
MSH6P52701 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 PDSS1P2-201ENST00000449397 678 ntBASIC5.91□□□□□ -1.46
MSH6P52701 RPL23AP81-201ENST00000455252 467 ntBASIC5.91□□□□□ -1.46
MSH6P52701 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
MSH6P52701 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.91□□□□□ -1.46
MSH6P52701 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
MSH6P52701 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MSH6P52701 ZNF285B-201ENST00000561698 1767 ntBASIC5.9□□□□□ -1.46
MSH6P52701 MAPK10-372ENST00000641954 3413 ntBASIC5.9□□□□□ -1.47
MSH6P52701 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MSH6P52701 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
MSH6P52701 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
MSH6P52701 Y_RNA.111-201ENST00000363248 100 ntBASIC5.9□□□□□ -1.47
MSH6P52701 AL592291.1-201ENST00000403830 352 ntBASIC5.9□□□□□ -1.47
MSH6P52701 SNORA57.3-201ENST00000411095 141 ntBASIC5.9□□□□□ -1.47
MSH6P52701 Z92545.1-201ENST00000411782 234 ntBASIC5.9□□□□□ -1.47
MSH6P52701 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.9□□□□□ -1.47
MSH6P52701 RPL23AP46-201ENST00000438548 490 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms