Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLCNKAP51800 AC090017.1-201ENST00000548612 1779 ntBASIC4.83□□□□□ -1.64
CLCNKAP51800 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLCNKAP51800 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.83□□□□□ -1.64
CLCNKAP51800 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC009313.2-201ENST00000417893 1941 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 RNU5E-10P-201ENST00000363506 118 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 RN7SKP103-201ENST00000363848 320 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 RNU6-244P-201ENST00000391028 104 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 AP002784.2-201ENST00000397300 549 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AL034374.1-201ENST00000406329 351 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 RNA5SP113-201ENST00000410486 84 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 RNA5SP345-201ENST00000410646 108 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 DEFB130D-201ENST00000426866 237 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AL049745.1-201ENST00000433953 286 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 MTND6P18-201ENST00000439477 513 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC073052.1-201ENST00000440417 714 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 PTMAP3-201ENST00000447474 330 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC091685.2-201ENST00000454924 864 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AURKAPS2-201ENST00000454983 333 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 RPL23AP56-201ENST00000460778 453 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 RPS20P4-201ENST00000461659 355 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC083982.1-201ENST00000485679 344 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 TPT1P3-201ENST00000492841 512 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC008427.1-201ENST00000503102 655 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 RN7SKP141-201ENST00000516167 338 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 Y_RNA.719-201ENST00000517156 106 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCNKAP51800 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC006116.5-201ENST00000591936 559 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC010424.2-201ENST00000607594 443 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 BX005214.3-202ENST00000619809 325 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC083843.3-201ENST00000623679 2186 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC104623.2-202ENST00000623477 4002 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
CLCNKAP51800 AC011447.7-201ENST00000624228 1590 ntBASIC4.82□□□□□ -1.64
CLCNKAP51800 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLCNKAP51800 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC008079.2-201ENST00000623543 20396 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 MAPK10-263ENST00000641052 4307 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 RNU6-298P-201ENST00000390888 96 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AL359643.1-201ENST00000404109 423 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC114755.2-201ENST00000413520 361 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC007738.1-201ENST00000413892 348 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 TBCAP2-201ENST00000416175 326 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 QRSL1P2-201ENST00000418582 964 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC099336.2-201ENST00000422457 254 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AL360081.1-201ENST00000428299 555 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC005189.1-201ENST00000431286 310 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC099560.2-201ENST00000457554 255 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 UBA52P3-201ENST00000491303 382 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLCNKAP51800 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.81□□□□□ -1.64
CLCNKAP51800 RNA5SP392-201ENST00000516905 112 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 RPL23AP53-201ENST00000521854 457 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 AC010376.1-201ENST00000522101 334 ntBASIC4.81□□□□□ -1.64
CLCNKAP51800 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms