Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 AL031119.1-201ENST00000404707 1879 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CLCN3P51790 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 SMG1P4-204ENST00000523028 4131 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 AC017079.1-201ENST00000333650 415 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 RNU6-1257P-201ENST00000384625 110 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 Z98745.1-201ENST00000402553 494 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 UBE2V1P11-201ENST00000411559 285 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 AL158825.1-201ENST00000414735 521 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCN3P51790 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.11□□□□□ -1.59
CLCN3P51790 AC026979.1-201ENST00000492525 396 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 RNA5SP249-201ENST00000516127 99 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 AC068831.4-201ENST00000556118 109 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.11□□□□□ -1.59
CLCN3P51790 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.11□□□□□ -1.59
CLCN3P51790 AL133243.1-201ENST00000614487 366 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 AC011472.4-201ENST00000615848 491 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 AC009269.6-201ENST00000621778 588 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 AC024023.1-201ENST00000624530 922 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 AC108751.5-201ENST00000492880 1336 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.11□□□□□ -1.59
CLCN3P51790 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CLCN3P51790 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLCN3P51790 OR56B2P-202ENST00000641377 2453 ntBASIC5.11□□□□□ -1.59
CLCN3P51790 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 AP000580.1-201ENST00000404439 358 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 TMBIM7P-201ENST00000418074 855 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 RPL7AP25-201ENST00000423357 805 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 RPL12P28-201ENST00000430852 489 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AC091390.1-201ENST00000433904 331 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AC073143.1-201ENST00000436316 395 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 TPT1P12-201ENST00000448968 492 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 RHEBP2-201ENST00000450289 600 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 TVP23BP2-201ENST00000455082 615 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 FCF1P6-201ENST00000456841 595 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 SCARNA10-201ENST00000459255 330 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 RPL7AP10-201ENST00000481016 791 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 AC110760.3-202ENST00000515177 371 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLCN3P51790 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCN3P51790 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 AL109741.3-201ENST00000561748 592 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AC106734.1-201ENST00000568646 663 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCN3P51790 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCN3P51790 AC079610.2-201ENST00000604818 690 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AL356218.2-201ENST00000605264 187 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AC021851.1-201ENST00000608537 1082 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AL445423.1-201ENST00000609941 536 ntBASIC5.1□□□□□ -1.59
CLCN3P51790 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCN3P51790 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCN3P51790 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLCN3P51790 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCN3P51790 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms