Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 Z99496.1-201ENST00000469424 1477 ntBASIC4.69□□□□□ -1.66
SOX2P48431 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 AC063976.2-201ENST00000425667 3556 ntBASIC4.69□□□□□ -1.66
SOX2P48431 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.69□□□□□ -1.66
SOX2P48431 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 AC004386.1-201ENST00000393214 761 ntBASIC4.69□□□□□ -1.66
SOX2P48431 OR7E101P-201ENST00000400428 513 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RNA5SP80-201ENST00000410475 111 ntBASIC4.69□□□□□ -1.66
SOX2P48431 OR51A3P-201ENST00000413596 924 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.69□□□□□ -1.66
SOX2P48431 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.69□□□□□ -1.66
SOX2P48431 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX2P48431 AC092809.1-201ENST00000441469 474 ntBASIC4.69□□□□□ -1.66
SOX2P48431 MTCO2P7-201ENST00000446518 666 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC073387.1-201ENST00000453261 709 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX2P48431 PNPLA4P1-201ENST00000458328 305 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RPL5P24-201ENST00000463742 885 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RPL23AP12-201ENST00000467573 473 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RAP1BP2-201ENST00000478270 544 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AL161747.1-201ENST00000480068 358 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RPL7AP10-201ENST00000481016 791 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RPL15P21-201ENST00000495592 567 ntBASIC4.69□□□□□ -1.66
SOX2P48431 OR2A20P-203ENST00000498397 1268 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC092349.1-201ENST00000504903 310 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX2P48431 AC010587.2-201ENST00000511727 448 ntBASIC4.69□□□□□ -1.66
SOX2P48431 MTND6P2-201ENST00000512226 524 ntBASIC4.69□□□□□ -1.66
SOX2P48431 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SOX2P48431 RPS27AP18-201ENST00000515536 459 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AL671862.1-201ENST00000515851 349 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RNU6-615P-201ENST00000516065 106 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RNU6-759P-201ENST00000516740 103 ntBASIC4.69□□□□□ -1.66
SOX2P48431 FTH1P11-201ENST00000517577 551 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 AC005832.3-201ENST00000537929 631 ntBASIC4.69□□□□□ -1.66
SOX2P48431 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX2P48431 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.69□□□□□ -1.66
SOX2P48431 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 AC090751.1-201ENST00000566966 267 ntBASIC4.69□□□□□ -1.66
SOX2P48431 DPRXP4-201ENST00000578053 568 ntBASIC4.69□□□□□ -1.66
SOX2P48431 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC006539.2-201ENST00000601729 572 ntBASIC4.69□□□□□ -1.66
SOX2P48431 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.69□□□□□ -1.66
SOX2P48431 OR2AS2P-201ENST00000606902 342 ntBASIC4.69□□□□□ -1.66
SOX2P48431 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 AL365181.4-201ENST00000609800 547 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 MIR6806-201ENST00000622141 64 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC091931.1-201ENST00000623488 728 ntBASIC4.69□□□□□ -1.66
SOX2P48431 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 ATE1-AS1-202ENST00000636460 506 ntBASIC4.69□□□□□ -1.66
SOX2P48431 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.69□□□□□ -1.66
SOX2P48431 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.69□□□□□ -1.66
SOX2P48431 AC114786.1-201ENST00000512892 1415 ntBASIC4.69□□□□□ -1.66
SOX2P48431 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SOX2P48431 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SOX2P48431 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 SMG1P7-201ENST00000565246 2704 ntBASIC4.68□□□□□ -1.66
SOX2P48431 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX2P48431 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX2P48431 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 AP000526.1-201ENST00000603308 1388 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX2P48431 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SOX2P48431 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 IL6STP1-201ENST00000346911 1020 ntBASIC4.68□□□□□ -1.66
SOX2P48431 RNA5SP394-201ENST00000364216 119 ntBASIC4.68□□□□□ -1.66
SOX2P48431 RNU6-304P-201ENST00000364855 107 ntBASIC4.68□□□□□ -1.66
SOX2P48431 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SOX2P48431 TMSB4XP8-201ENST00000402089 135 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 TMSB4XP6-201ENST00000415187 135 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.68□□□□□ -1.66
SOX2P48431 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 TMSB4XP1-201ENST00000424567 135 ntBASIC4.68□□□□□ -1.66
SOX2P48431 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.68□□□□□ -1.66
SOX2P48431 RPL7P4-203ENST00000430239 730 ntBASIC4.68□□□□□ -1.66
SOX2P48431 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.68□□□□□ -1.66
SOX2P48431 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms