Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC090686.1-201ENST00000481577 749 ntBASIC4.19□□□□□ -1.74
CDX1P47902 RN7SL423P-201ENST00000486202 304 ntBASIC4.19□□□□□ -1.74
CDX1P47902 IGBP1P4-201ENST00000503202 879 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC006499.3-201ENST00000506077 748 ntBASIC4.19□□□□□ -1.74
CDX1P47902 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.19□□□□□ -1.74
CDX1P47902 HIGD1AP14-201ENST00000507617 282 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.19□□□□□ -1.74
CDX1P47902 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 OR10G5P-201ENST00000532733 358 ntBASIC4.19□□□□□ -1.74
CDX1P47902 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDX1P47902 HAUS8P1-201ENST00000549005 542 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC084757.1-201ENST00000559987 490 ntBASIC4.19□□□□□ -1.74
CDX1P47902 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.19□□□□□ -1.74
CDX1P47902 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.19□□□□□ -1.74
CDX1P47902 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.19□□□□□ -1.74
CDX1P47902 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.19□□□□□ -1.74
CDX1P47902 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.19□□□□□ -1.74
CDX1P47902 AL158050.2-201ENST00000605336 568 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC097504.2-201ENST00000608088 454 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AF129408.1-201ENST00000608767 431 ntBASIC4.19□□□□□ -1.74
CDX1P47902 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 OR52B5P-202ENST00000641118 1110 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.19□□□□□ -1.74
CDX1P47902 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 DDX18P3-201ENST00000404856 2007 ntBASIC4.19□□□□□ -1.74
CDX1P47902 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDX1P47902 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDX1P47902 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.19□□□□□ -1.74
CDX1P47902 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.18□□□□□ -1.74
CDX1P47902 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 CASC19-261ENST00000641853 1638 ntBASIC4.18□□□□□ -1.74
CDX1P47902 MAPK10-320ENST00000641462 6696 ntBASIC4.18□□□□□ -1.74
CDX1P47902 SNORD56.6-201ENST00000384569 71 ntBASIC4.18□□□□□ -1.74
CDX1P47902 HSPA8P15-201ENST00000401676 786 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AL603865.2-201ENST00000401679 213 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.18□□□□□ -1.74
CDX1P47902 RPSAP35-201ENST00000413753 818 ntBASIC4.18□□□□□ -1.74
CDX1P47902 RPL35AP24-201ENST00000413846 330 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.18□□□□□ -1.74
CDX1P47902 TAF13P2-201ENST00000416876 286 ntBASIC4.18□□□□□ -1.74
CDX1P47902 BMS1P13-201ENST00000417301 885 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AL354692.1-201ENST00000423044 315 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC108075.1-201ENST00000424692 529 ntBASIC4.18□□□□□ -1.74
CDX1P47902 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.18□□□□□ -1.74
CDX1P47902 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.18□□□□□ -1.74
CDX1P47902 HSFY7P-201ENST00000432672 318 ntBASIC4.18□□□□□ -1.74
CDX1P47902 CEACAMP1-201ENST00000434624 1035 ntBASIC4.18□□□□□ -1.74
CDX1P47902 HSFY8P-201ENST00000437934 318 ntBASIC4.18□□□□□ -1.74
CDX1P47902 ARF4P4-201ENST00000439608 520 ntBASIC4.18□□□□□ -1.74
CDX1P47902 CNOT7P2-201ENST00000441051 832 ntBASIC4.18□□□□□ -1.74
CDX1P47902 ARL4AP3-201ENST00000441452 574 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AL357520.1-201ENST00000441557 453 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.18□□□□□ -1.74
CDX1P47902 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.18□□□□□ -1.74
CDX1P47902 AL050341.1-201ENST00000447743 313 ntBASIC4.18□□□□□ -1.74
CDX1P47902 HMGB3P21-201ENST00000452483 547 ntBASIC4.18□□□□□ -1.74
CDX1P47902 HSFY5P-201ENST00000453726 309 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC092754.1-201ENST00000472975 479 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC104689.1-201ENST00000473356 768 ntBASIC4.18□□□□□ -1.74
CDX1P47902 RN7SL799P-201ENST00000475891 298 ntBASIC4.18□□□□□ -1.74
CDX1P47902 RPS4XP1-201ENST00000482189 787 ntBASIC4.18□□□□□ -1.74
CDX1P47902 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.18□□□□□ -1.74
CDX1P47902 SUMO2P5-201ENST00000506790 245 ntBASIC4.18□□□□□ -1.74
CDX1P47902 STMN1P2-201ENST00000508435 439 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC021106.1-201ENST00000509020 1058 ntBASIC4.18□□□□□ -1.74
CDX1P47902 PGBD4P4-201ENST00000509673 613 ntBASIC4.18□□□□□ -1.74
CDX1P47902 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.18□□□□□ -1.74
CDX1P47902 AF186190.1-201ENST00000517470 480 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.18□□□□□ -1.74
CDX1P47902 AC022790.1-201ENST00000522872 204 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.18□□□□□ -1.74
CDX1P47902 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.18□□□□□ -1.74
CDX1P47902 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDX1P47902 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.18□□□□□ -1.74
CDX1P47902 VN1R87P-201ENST00000596706 487 ntBASIC4.18□□□□□ -1.74
CDX1P47902 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 AC005377.1-201ENST00000605126 456 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AP002802.2-201ENST00000605877 235 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC092953.2-201ENST00000608000 699 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC112503.1-201ENST00000608436 391 ntBASIC4.18□□□□□ -1.74
CDX1P47902 VN1R74P-201ENST00000613259 503 ntBASIC4.18□□□□□ -1.74
CDX1P47902 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC109583.2-201ENST00000617367 129 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC234782.5-201ENST00000617723 324 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC243756.2-201ENST00000618406 463 ntBASIC4.18□□□□□ -1.74
CDX1P47902 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDX1P47902 AC009269.6-201ENST00000621778 588 ntBASIC4.18□□□□□ -1.74
CDX1P47902 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.18□□□□□ -1.74
CDX1P47902 AC013437.2-201ENST00000639587 677 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AC139713.2-210ENST00000641741 992 ntBASIC4.18□□□□□ -1.74
CDX1P47902 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.18□□□□□ -1.74
CDX1P47902 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms