Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RN7SKP278-201ENST00000410504 342 ntBASIC4.85□□□□□ -1.63
SSR1P43307 Z74021.1-201ENST00000423610 407 ntBASIC4.85□□□□□ -1.63
SSR1P43307 RPL21P43-201ENST00000425440 472 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.85□□□□□ -1.63
SSR1P43307 AC097523.2-201ENST00000435551 652 ntBASIC4.85□□□□□ -1.63
SSR1P43307 USP9YP7-201ENST00000436723 430 ntBASIC4.85□□□□□ -1.63
SSR1P43307 PPIAP17-201ENST00000438507 471 ntBASIC4.85□□□□□ -1.63
SSR1P43307 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.85□□□□□ -1.63
SSR1P43307 USP9YP32-201ENST00000452432 430 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC091685.2-201ENST00000454924 864 ntBASIC4.85□□□□□ -1.63
SSR1P43307 SEPT14P1-201ENST00000458703 648 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.85□□□□□ -1.63
SSR1P43307 NIPA2P2-201ENST00000496376 1083 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.85□□□□□ -1.63
SSR1P43307 MTCO3P42-201ENST00000509488 518 ntBASIC4.85□□□□□ -1.63
SSR1P43307 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.85□□□□□ -1.63
SSR1P43307 MTCO3P39-201ENST00000514812 518 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.85□□□□□ -1.63
SSR1P43307 AC069240.1-201ENST00000548774 375 ntBASIC4.85□□□□□ -1.63
SSR1P43307 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.85□□□□□ -1.63
SSR1P43307 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.85□□□□□ -1.63
SSR1P43307 AC091178.1-203ENST00000584586 279 ntBASIC4.85□□□□□ -1.63
SSR1P43307 OR7E18P-201ENST00000592589 702 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AL512782.1-201ENST00000603093 364 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AL049634.3-201ENST00000604968 457 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC023043.4-201ENST00000612081 449 ntBASIC4.85□□□□□ -1.63
SSR1P43307 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSR1P43307 MIR6853-201ENST00000619642 74 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC068870.2-201ENST00000620635 389 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.85□□□□□ -1.63
SSR1P43307 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.85□□□□□ -1.63
SSR1P43307 AC131971.1-201ENST00000332881 1482 ntBASIC4.85□□□□□ -1.63
SSR1P43307 AC066616.2-201ENST00000559334 1481 ntBASIC4.85□□□□□ -1.63
SSR1P43307 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSR1P43307 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSR1P43307 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.85□□□□□ -1.63
SSR1P43307 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.85□□□□□ -1.63
SSR1P43307 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSR1P43307 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.84□□□□□ -1.63
SSR1P43307 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSR1P43307 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSR1P43307 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.84□□□□□ -1.63
SSR1P43307 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSR1P43307 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSR1P43307 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSR1P43307 SNORA71.2-201ENST00000364941 134 ntBASIC4.84□□□□□ -1.63
SSR1P43307 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SSR1P43307 RNA5SP113-201ENST00000410486 84 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC140479.3-201ENST00000418944 1126 ntBASIC4.84□□□□□ -1.63
SSR1P43307 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSR1P43307 AC004448.2-201ENST00000422360 586 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.84□□□□□ -1.63
SSR1P43307 AC016831.4-201ENST00000438302 307 ntBASIC4.84□□□□□ -1.63
SSR1P43307 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.84□□□□□ -1.63
SSR1P43307 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.84□□□□□ -1.63
SSR1P43307 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.84□□□□□ -1.63
SSR1P43307 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.84□□□□□ -1.63
SSR1P43307 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.84□□□□□ -1.63
SSR1P43307 OR4C2P-201ENST00000530855 1064 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC027455.1-201ENST00000574104 594 ntBASIC4.84□□□□□ -1.63
SSR1P43307 MIR3934-201ENST00000579806 107 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC209154.1-201ENST00000582156 337 ntBASIC4.84□□□□□ -1.63
SSR1P43307 MIR4512-201ENST00000583257 77 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC110743.1-201ENST00000584870 478 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC005255.1-201ENST00000593748 216 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC133644.2-201ENST00000608142 540 ntBASIC4.84□□□□□ -1.63
SSR1P43307 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.84□□□□□ -1.63
SSR1P43307 AC103858.2-201ENST00000621471 543 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC018445.2-201ENST00000622987 260 ntBASIC4.84□□□□□ -1.63
SSR1P43307 AC005086.4-201ENST00000623065 213 ntBASIC4.84□□□□□ -1.63
SSR1P43307 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.84□□□□□ -1.63
SSR1P43307 AP000843.1-201ENST00000624880 701 ntBASIC4.84□□□□□ -1.63
SSR1P43307 ZFRP1-201ENST00000457579 2970 ntBASIC4.84□□□□□ -1.63
SSR1P43307 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SSR1P43307 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
SSR1P43307 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSR1P43307 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSR1P43307 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSR1P43307 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.84□□□□□ -1.64
SSR1P43307 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSR1P43307 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSR1P43307 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSR1P43307 AL590240.1-201ENST00000334118 313 ntBASIC4.83□□□□□ -1.64
SSR1P43307 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSR1P43307 Y_RNA.62-201ENST00000362840 99 ntBASIC4.83□□□□□ -1.64
SSR1P43307 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.83□□□□□ -1.64
SSR1P43307 MIR323B-201ENST00000385269 82 ntBASIC4.83□□□□□ -1.64
SSR1P43307 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSR1P43307 RNA5SP39-201ENST00000411245 120 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
SSR1P43307 RPS12P10-201ENST00000427031 377 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.83□□□□□ -1.64
SSR1P43307 RPL31P44-201ENST00000447680 377 ntBASIC4.83□□□□□ -1.64
SSR1P43307 AL935212.3-201ENST00000450729 284 ntBASIC4.83□□□□□ -1.64
SSR1P43307 RPL7P61-201ENST00000451721 751 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms