Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU4-18P-201ENST00000516751 149 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 AC022616.2-201ENST00000523185 300 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 PHBP17-201ENST00000528576 541 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 AC100770.1-201ENST00000532310 322 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF9P41273 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF9P41273 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF9P41273 VPS35P1-201ENST00000563400 1518 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.59□□□□□ -1.67
TNFSF9P41273 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF9P41273 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.59□□□□□ -1.67
TNFSF9P41273 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 MIR8059-201ENST00000620427 81 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 AC009951.1-201ENST00000623674 2614 ntBASIC4.59□□□□□ -1.67
TNFSF9P41273 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF9P41273 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.59□□□□□ -1.67
TNFSF9P41273 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
TNFSF9P41273 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.59□□□□□ -1.68
TNFSF9P41273 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TNFSF9P41273 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
TNFSF9P41273 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 AC006971.1-201ENST00000407916 4486 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 TCP1P3-201ENST00000414406 1498 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TNFSF9P41273 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.58□□□□□ -1.68
TNFSF9P41273 RNA5SP28-201ENST00000363841 119 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 OR13C3-201ENST00000374781 1108 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 VN1R8P-201ENST00000407739 893 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 AL161631.1-201ENST00000417933 486 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 COX6CP15-201ENST00000426313 211 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFSF9P41273 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.58□□□□□ -1.68
TNFSF9P41273 RPS20P4-201ENST00000461659 355 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 RPS27AP13-201ENST00000498403 237 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 AC099522.1-202ENST00000514718 367 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 MTCO1P35-201ENST00000515270 228 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 FTH1P11-201ENST00000517577 551 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.58□□□□□ -1.68
TNFSF9P41273 AC105233.3-201ENST00000531125 744 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.58□□□□□ -1.68
TNFSF9P41273 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.58□□□□□ -1.68
TNFSF9P41273 MIR3160-1-201ENST00000577972 85 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFSF9P41273 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.58□□□□□ -1.68
TNFSF9P41273 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.58□□□□□ -1.68
TNFSF9P41273 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TNFSF9P41273 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFSF9P41273 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.58□□□□□ -1.68
TNFSF9P41273 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TNFSF9P41273 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TNFSF9P41273 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TNFSF9P41273 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 AL133243.3-201ENST00000617415 3004 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.57□□□□□ -1.68
TNFSF9P41273 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 RNU1-94P-201ENST00000362627 173 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 RNA5SP515-201ENST00000364570 118 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 SNORA70C-201ENST00000384538 135 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 RNA5SP372-201ENST00000390836 115 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.57□□□□□ -1.68
TNFSF9P41273 AC073335.1-201ENST00000427776 363 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 RPS27AP12-201ENST00000429552 465 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.57□□□□□ -1.68
TNFSF9P41273 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.57□□□□□ -1.68
TNFSF9P41273 RPL12P18-201ENST00000437175 325 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 ARL4AP3-201ENST00000441452 574 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 AC005008.1-201ENST00000456151 612 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.57□□□□□ -1.68
TNFSF9P41273 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TNFSF9P41273 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.57□□□□□ -1.68
TNFSF9P41273 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.57□□□□□ -1.68
TNFSF9P41273 RNA5SP360-201ENST00000516555 118 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TNFSF9P41273 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TNFSF9P41273 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.57□□□□□ -1.68
TNFSF9P41273 AC007224.1-201ENST00000564410 144 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 SNORD39.2-201ENST00000579995 76 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 AC006116.5-201ENST00000591936 559 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 AL591034.3-201ENST00000605511 685 ntBASIC4.57□□□□□ -1.68
TNFSF9P41273 AC023043.4-201ENST00000612081 449 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms