Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD12P35452 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
HOXD12P35452 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXD12P35452 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXD12P35452 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HOXD12P35452 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HOXD12P35452 RNA5SP123-201ENST00000363244 119 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
HOXD12P35452 CYB5AP4-201ENST00000396692 399 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
HOXD12P35452 HSPA8P15-201ENST00000401676 786 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 MTCO2P31-201ENST00000402702 684 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 COX6B1P1-201ENST00000415962 213 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AL590139.1-201ENST00000416267 400 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD12P35452 FTH1P16-201ENST00000435241 552 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD12P35452 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HOXD12P35452 Z73417.1-201ENST00000447373 778 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 IGBP1P3-201ENST00000447449 1000 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 TRY2P-201ENST00000448860 689 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 SNORD125-201ENST00000459538 96 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 PDCL3P4-201ENST00000489621 720 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AC026414.1-201ENST00000504046 698 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD12P35452 AC005351.1-201ENST00000511152 786 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 RN7SKP260-201ENST00000516907 149 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXD12P35452 AC137627.1-201ENST00000545761 289 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AC011611.5-201ENST00000552477 578 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 RN7SL356P-201ENST00000582228 248 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD12P35452 AC245036.5-201ENST00000596330 847 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AC234771.5-201ENST00000600161 514 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD12P35452 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 AL162574.1-201ENST00000615702 950 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 U6.48-201ENST00000618523 106 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AP002791.1-201ENST00000623291 381 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 AC104985.3-201ENST00000623479 597 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 CR392039.4-201ENST00000624968 501 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 OR2L1P-202ENST00000641567 1023 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 AC099786.3-201ENST00000565735 1410 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 CASC19-204ENST00000641001 2055 ntBASIC5.28□□□□□ -1.56
HOXD12P35452 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD12P35452 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD12P35452 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 AL731566.1-201ENST00000620490 1937 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXD12P35452 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXD12P35452 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXD12P35452 RNVU1-6-201ENST00000364688 164 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXD12P35452 SNORA70.6-201ENST00000383934 134 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 RPL7P27-201ENST00000403775 720 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 TCEA1P4-201ENST00000415066 844 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD12P35452 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD12P35452 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD12P35452 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD12P35452 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD12P35452 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXD12P35452 AC000374.1-201ENST00000434698 1745 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD12P35452 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD12P35452 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD12P35452 FTH1P2-201ENST00000466086 412 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 RPL6P9-201ENST00000466502 859 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD12P35452 AC134050.1-201ENST00000495088 933 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXD12P35452 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXD12P35452 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXD12P35452 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXD12P35452 AC109464.1-201ENST00000511091 819 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 RNU6-1028P-201ENST00000517164 93 ntBASIC5.27□□□□□ -1.57
HOXD12P35452 RNA5SP373-201ENST00000517271 95 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms