Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 VN1R32P-201ENST00000452234 905 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 AL133244.1-201ENST00000456007 258 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC010374.1-201ENST00000503762 1237 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC005520.3-201ENST00000602874 370 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 SNORD91B-202ENST00000608459 222 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 FAM27D1-201ENST00000612308 341 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 AC015908.5-201ENST00000623289 343 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA9P31269 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HOXA9P31269 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA9P31269 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.6□□□□□ -1.67
HOXA9P31269 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HOXA9P31269 CASC19-204ENST00000641001 2055 ntBASIC4.6□□□□□ -1.67
HOXA9P31269 AC005332.5-201ENST00000591222 2919 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 MAPK10-349ENST00000641767 3661 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA9P31269 SPRR2C-201ENST00000290702 219 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 RNU1-85P-201ENST00000364127 164 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA9P31269 MIR921-201ENST00000401133 56 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 AL589994.1-201ENST00000404962 340 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA9P31269 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 AC016687.1-201ENST00000482574 353 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 RPL21P129-201ENST00000491732 478 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXA9P31269 RNA5SP49-201ENST00000516450 115 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 snoU109.6-201ENST00000516831 118 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXA9P31269 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXA9P31269 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXA9P31269 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 AC245389.2-201ENST00000616023 576 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
HOXA9P31269 AC242843.1-201ENST00000618702 573 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HOXA9P31269 AP001273.1-201ENST00000624493 3152 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 BMS1P21-201ENST00000634565 365 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXA9P31269 AL592182.3-201ENST00000642132 3304 ntBASIC4.59□□□□□ -1.67
HOXA9P31269 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA9P31269 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HOXA9P31269 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HOXA9P31269 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXA9P31269 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
HOXA9P31269 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.59□□□□□ -1.68
HOXA9P31269 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXA9P31269 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXA9P31269 AC026523.2-201ENST00000625039 7739 ntBASIC4.59□□□□□ -1.68
HOXA9P31269 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
HOXA9P31269 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 MIR134-201ENST00000385258 73 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXA9P31269 RPS27AP11-201ENST00000402798 447 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 Z74021.1-201ENST00000423610 407 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 RPL21P91-201ENST00000429231 479 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXA9P31269 TDGF1P1-201ENST00000445734 527 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA9P31269 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.58□□□□□ -1.68
HOXA9P31269 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA9P31269 AC090181.2-201ENST00000602975 672 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms