Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PDGFRAP16234 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PDGFRAP16234 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFRAP16234 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 RN7SKP115-201ENST00000363177 317 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 MIR298-201ENST00000401212 88 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 RN7SKP267-201ENST00000410381 285 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 RPL26P29-201ENST00000415623 438 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AL590139.1-201ENST00000416267 400 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AC140479.3-201ENST00000418944 1126 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 ELOCP10-201ENST00000440624 327 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC073264.2-201ENST00000448886 166 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC108751.2-201ENST00000469993 231 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 NPM1P17-201ENST00000479221 602 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFRAP16234 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 MTND3P24-201ENST00000506306 329 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AL110118.1-201ENST00000553543 400 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC025918.2-201ENST00000558683 763 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC104785.1-201ENST00000603220 588 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 ELOCP34-201ENST00000604436 327 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 COX6CP4-201ENST00000605798 228 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.89□□□□□ -1.63
PDGFRAP16234 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 MIR7703-201ENST00000620784 77 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFRAP16234 AC091046.3-201ENST00000631455 1574 ntBASIC4.89□□□□□ -1.63
PDGFRAP16234 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDGFRAP16234 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.89□□□□□ -1.63
PDGFRAP16234 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDGFRAP16234 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 AC009229.4-201ENST00000623854 1947 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFRAP16234 RNU6-304P-201ENST00000364855 107 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 RNU6-452P-201ENST00000384406 107 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 MIR1271-201ENST00000408537 86 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 RNU2-17P-201ENST00000410290 190 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.88□□□□□ -1.63
PDGFRAP16234 AC108463.1-201ENST00000450258 347 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 RPS29P33-201ENST00000456717 146 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 RNU6-1218P-201ENST00000458990 108 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 RPL12P20-201ENST00000475538 479 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC010468.3-201ENST00000508225 458 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.88□□□□□ -1.63
PDGFRAP16234 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.88□□□□□ -1.63
PDGFRAP16234 RN7SKP141-201ENST00000516167 338 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 RNU6-347P-201ENST00000516658 105 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 SNORA76.2-201ENST00000517095 137 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 IGKV2D-10-201ENST00000520194 281 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AP006289.1-201ENST00000538089 277 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 CR383656.6-201ENST00000550518 394 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.88□□□□□ -1.63
PDGFRAP16234 MIR4330-201ENST00000579077 105 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 MIR548Y-201ENST00000582739 110 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.88□□□□□ -1.63
PDGFRAP16234 AC010200.2-201ENST00000605098 235 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 MIR6748-201ENST00000610433 71 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AC022106.2-201ENST00000620114 757 ntBASIC4.88□□□□□ -1.63
PDGFRAP16234 AP006248.3-201ENST00000623580 594 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms