Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC1P07992 AC005520.3-201ENST00000602874 370 ntBASIC4.13□□□□□ -1.75
ERCC1P07992 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.13□□□□□ -1.75
ERCC1P07992 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.13□□□□□ -1.75
ERCC1P07992 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC1P07992 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.13□□□□□ -1.75
ERCC1P07992 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC1P07992 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC1P07992 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.13□□□□□ -1.75
ERCC1P07992 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.13□□□□□ -1.75
ERCC1P07992 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
ERCC1P07992 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
ERCC1P07992 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ERCC1P07992 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.12□□□□□ -1.75
ERCC1P07992 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 AL118496.1-201ENST00000440201 1812 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AP001002.1-201ENST00000625148 1513 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC1P07992 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC1P07992 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC1P07992 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 OR56B2P-201ENST00000317102 954 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 RNU4-23P-201ENST00000362839 140 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 RNA5SP372-201ENST00000390836 115 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 RPS3AP23-201ENST00000401762 784 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 RPL31P52-201ENST00000407532 367 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 RN7SKP216-201ENST00000411050 312 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 RNA5SP498-201ENST00000411342 120 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.12□□□□□ -1.75
ERCC1P07992 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 MTCYBP12-201ENST00000440559 1134 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 TDGF1P1-201ENST00000445734 527 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC073264.2-201ENST00000448886 166 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AL162591.2-201ENST00000449634 317 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC1P07992 NDUFA12P1-201ENST00000455914 406 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC005008.1-201ENST00000456151 612 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 AC025164.1-201ENST00000496249 478 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC1P07992 MRPS33P2-201ENST00000507850 322 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC1P07992 OR4V1P-201ENST00000525394 1140 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ERCC1P07992 HIGD1AP5-201ENST00000529959 259 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.12□□□□□ -1.75
ERCC1P07992 AC137768.1-201ENST00000549998 553 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.12□□□□□ -1.75
ERCC1P07992 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC1P07992 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC1P07992 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.12□□□□□ -1.75
ERCC1P07992 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 AC123768.4-201ENST00000616244 701 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC005086.4-201ENST00000623065 213 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 AC000123.2-201ENST00000623124 461 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.12□□□□□ -1.75
ERCC1P07992 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.12□□□□□ -1.75
ERCC1P07992 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
ERCC1P07992 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 AC096656.1-201ENST00000623826 1364 ntBASIC4.12□□□□□ -1.75
ERCC1P07992 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ERCC1P07992 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ERCC1P07992 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
ERCC1P07992 AC022893.2-201ENST00000564832 3296 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
ERCC1P07992 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ERCC1P07992 CYB5AP4-201ENST00000396692 399 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 RN7SKP267-201ENST00000410381 285 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC1P07992 ATG4AP1-201ENST00000416893 538 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 DNAJC19P7-201ENST00000428811 344 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 H2AFZP6-201ENST00000444403 394 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ERCC1P07992 RPL7P31-201ENST00000450192 724 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 RN7SL817P-201ENST00000480777 288 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AC083829.1-201ENST00000503756 657 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 FKBP1BP1-201ENST00000553366 325 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 MIR4512-201ENST00000583257 77 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AC234771.5-201ENST00000600161 514 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AP004372.1-201ENST00000604842 844 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 AC100847.1-201ENST00000611316 481 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.11□□□□□ -1.75
ERCC1P07992 MIR6780A-201ENST00000615089 68 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AL391597.1-201ENST00000618707 694 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AL359757.1-201ENST00000623176 255 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.11□□□□□ -1.75
ERCC1P07992 AC079298.2-201ENST00000623885 459 ntBASIC4.11□□□□□ -1.75
ERCC1P07992 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms