Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.32□□□□□ -1.72
MT-ND1P03886 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MT-ND1P03886 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MT-ND1P03886 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MT-ND1P03886 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
MT-ND1P03886 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC067945.1-201ENST00000342609 618 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 RPS24P12-201ENST00000402084 394 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MT-ND1P03886 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.31□□□□□ -1.72
MT-ND1P03886 CHEK2P3-201ENST00000416118 248 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 OR2X1P-201ENST00000421144 687 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 EIF4EP1-201ENST00000422311 642 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 MTND4P24-201ENST00000424002 397 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC073508.1-201ENST00000428866 656 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.31□□□□□ -1.72
MT-ND1P03886 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 MTND3P3-201ENST00000505004 126 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 GAPDHP56-201ENST00000506031 988 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 RNU1-6P-201ENST00000516290 144 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 SNORA26.10-201ENST00000516427 141 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AF186190.1-201ENST00000517470 480 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 HMGB1P46-201ENST00000520062 610 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.31□□□□□ -1.72
MT-ND1P03886 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
MT-ND1P03886 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 OR10G5P-201ENST00000532733 358 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC084757.1-201ENST00000559987 490 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 MIR548Y-201ENST00000582739 110 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC103792.1-201ENST00000603591 919 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 OR7A19P-201ENST00000608051 733 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC243654.2-201ENST00000612843 443 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC091905.4-201ENST00000623432 202 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AC112694.2-201ENST00000623697 768 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.31□□□□□ -1.72
MT-ND1P03886 BMS1P21-201ENST00000634565 365 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.31□□□□□ -1.72
MT-ND1P03886 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.31□□□□□ -1.72
MT-ND1P03886 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
MT-ND1P03886 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MT-ND1P03886 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AL391684.1-202ENST00000641293 1636 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 ZFRP1-201ENST00000457579 2970 ntBASIC4.31□□□□□ -1.72
MT-ND1P03886 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.31□□□□□ -1.72
MT-ND1P03886 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
MT-ND1P03886 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MT-ND1P03886 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-ND1P03886 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC009501.3-201ENST00000605001 1352 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
MT-ND1P03886 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 OR2B7P-201ENST00000429302 934 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC023141.6-201ENST00000429418 337 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 MTCO1P52-201ENST00000433928 531 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC112498.1-201ENST00000444401 332 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC108729.2-201ENST00000476543 840 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC008953.1-201ENST00000497334 318 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-ND1P03886 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-ND1P03886 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC106806.2-201ENST00000509365 500 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC112206.4-201ENST00000515142 405 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
MT-ND1P03886 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.3□□□□□ -1.72
MT-ND1P03886 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AL121834.1-201ENST00000572284 509 ntBASIC4.3□□□□□ -1.72
MT-ND1P03886 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-ND1P03886 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.3□□□□□ -1.72
MT-ND1P03886 AC005776.1-201ENST00000603164 290 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms