Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MIR4270-201ENST00000581799 70 ntBASIC4.77□□□□□ -1.65
LDLRP01130 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 AC068790.4-201ENST00000602474 263 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AL158050.2-201ENST00000605336 568 ntBASIC4.77□□□□□ -1.65
LDLRP01130 SNORD91B-202ENST00000608459 222 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AF129408.1-201ENST00000608767 431 ntBASIC4.77□□□□□ -1.65
LDLRP01130 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.77□□□□□ -1.65
LDLRP01130 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.77□□□□□ -1.65
LDLRP01130 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 AL356118.1-201ENST00000635272 1078 ntBASIC4.77□□□□□ -1.65
LDLRP01130 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.77□□□□□ -1.65
LDLRP01130 AL133268.1-201ENST00000405676 1401 ntBASIC4.77□□□□□ -1.65
LDLRP01130 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LDLRP01130 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
LDLRP01130 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LDLRP01130 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 MTND5P11-201ENST00000511037 1812 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC005332.5-201ENST00000591222 2919 ntBASIC4.76□□□□□ -1.65
LDLRP01130 MFSD8-216ENST00000641147 4009 ntBASIC4.76□□□□□ -1.65
LDLRP01130 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 AC126755.2-208ENST00000327792 462 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC138969.1-213ENST00000331436 462 ntBASIC4.76□□□□□ -1.65
LDLRP01130 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 AP000580.1-201ENST00000404439 358 ntBASIC4.76□□□□□ -1.65
LDLRP01130 OR4K12P-201ENST00000406538 961 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL158825.1-201ENST00000414735 521 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.76□□□□□ -1.65
LDLRP01130 AC019050.1-201ENST00000418508 492 ntBASIC4.76□□□□□ -1.65
LDLRP01130 DNAJC19P7-201ENST00000428811 344 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.76□□□□□ -1.65
LDLRP01130 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.76□□□□□ -1.65
LDLRP01130 CACYBPP1-201ENST00000438592 684 ntBASIC4.76□□□□□ -1.65
LDLRP01130 MTND6P18-201ENST00000439477 513 ntBASIC4.76□□□□□ -1.65
LDLRP01130 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.76□□□□□ -1.65
LDLRP01130 AC069540.1-201ENST00000446320 988 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL096829.2-201ENST00000446582 742 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL606517.1-201ENST00000446914 387 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 AC091153.1-201ENST00000466297 402 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC108751.2-201ENST00000469993 231 ntBASIC4.76□□□□□ -1.65
LDLRP01130 RN7SL441P-201ENST00000492388 296 ntBASIC4.76□□□□□ -1.65
LDLRP01130 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC025459.1-201ENST00000504072 156 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.76□□□□□ -1.65
LDLRP01130 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.76□□□□□ -1.65
LDLRP01130 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 AC108120.2-201ENST00000512973 294 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.76□□□□□ -1.65
LDLRP01130 AC008033.2-201ENST00000542626 177 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL049870.4-201ENST00000555741 486 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AL121594.4-201ENST00000556211 1196 ntBASIC4.76□□□□□ -1.65
LDLRP01130 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.76□□□□□ -1.65
LDLRP01130 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.76□□□□□ -1.65
LDLRP01130 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 AC090912.3-201ENST00000609775 533 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AP004607.9-201ENST00000618202 316 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AP000484.1-201ENST00000620067 1252 ntBASIC4.76□□□□□ -1.65
LDLRP01130 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.76□□□□□ -1.65
LDLRP01130 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.76□□□□□ -1.65
LDLRP01130 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.76□□□□□ -1.65
LDLRP01130 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LDLRP01130 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.76□□□□□ -1.65
LDLRP01130 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.75□□□□□ -1.65
LDLRP01130 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 AC104118.1-201ENST00000607625 1589 ntBASIC4.75□□□□□ -1.65
LDLRP01130 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.75□□□□□ -1.65
LDLRP01130 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
LDLRP01130 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LDLRP01130 RNA5SP90-201ENST00000364801 99 ntBASIC4.75□□□□□ -1.65
LDLRP01130 RNU6-532P-201ENST00000384318 107 ntBASIC4.75□□□□□ -1.65
LDLRP01130 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.75□□□□□ -1.65
LDLRP01130 AL512430.2-201ENST00000406786 339 ntBASIC4.75□□□□□ -1.65
LDLRP01130 RNU4-74P-201ENST00000411280 161 ntBASIC4.75□□□□□ -1.65
LDLRP01130 OR2AM1P-201ENST00000422137 422 ntBASIC4.75□□□□□ -1.65
LDLRP01130 CKS1BP6-201ENST00000424932 240 ntBASIC4.75□□□□□ -1.65
LDLRP01130 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.75□□□□□ -1.65
LDLRP01130 MTCO1P43-201ENST00000431831 488 ntBASIC4.75□□□□□ -1.65
LDLRP01130 AC006994.1-201ENST00000438212 839 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 459.3 ms