Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORD74.4-201ENST00000364129 80 ntBASIC4.38□□□□□ -1.71
LSM1O15116 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.38□□□□□ -1.71
LSM1O15116 SNORA51.8-201ENST00000384234 132 ntBASIC4.38□□□□□ -1.71
LSM1O15116 Z98745.1-201ENST00000402553 494 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AL078604.1-201ENST00000404609 466 ntBASIC4.38□□□□□ -1.71
LSM1O15116 RN7SKP222-201ENST00000410651 315 ntBASIC4.38□□□□□ -1.71
LSM1O15116 GSTM3P2-201ENST00000412746 530 ntBASIC4.38□□□□□ -1.71
LSM1O15116 BX510359.2-201ENST00000417920 305 ntBASIC4.38□□□□□ -1.71
LSM1O15116 BX510359.3-201ENST00000422168 306 ntBASIC4.38□□□□□ -1.71
LSM1O15116 NPM1P26-201ENST00000426339 738 ntBASIC4.38□□□□□ -1.71
LSM1O15116 MTCO1P45-201ENST00000431457 267 ntBASIC4.38□□□□□ -1.71
LSM1O15116 YWHAEP5-201ENST00000431545 765 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC016831.4-201ENST00000438302 307 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 SUMO2P1-206ENST00000445436 284 ntBASIC4.38□□□□□ -1.71
LSM1O15116 RPS27AP15-201ENST00000447672 466 ntBASIC4.38□□□□□ -1.71
LSM1O15116 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 FABP3P2-201ENST00000453169 399 ntBASIC4.38□□□□□ -1.71
LSM1O15116 OR2AF1P-201ENST00000454899 889 ntBASIC4.38□□□□□ -1.71
LSM1O15116 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.38□□□□□ -1.71
LSM1O15116 AC063943.1-201ENST00000465434 453 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.38□□□□□ -1.71
LSM1O15116 AC104763.1-201ENST00000475274 360 ntBASIC4.38□□□□□ -1.71
LSM1O15116 RPL7P16-201ENST00000479738 738 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC012158.1-204ENST00000483430 465 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC008897.1-201ENST00000494006 347 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.38□□□□□ -1.71
LSM1O15116 AC020593.1-201ENST00000507399 299 ntBASIC4.38□□□□□ -1.71
LSM1O15116 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 AC108471.1-201ENST00000513977 287 ntBASIC4.38□□□□□ -1.71
LSM1O15116 RN7SKP276-201ENST00000516242 268 ntBASIC4.38□□□□□ -1.71
LSM1O15116 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC100770.1-201ENST00000532310 322 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 AC092851.1-201ENST00000535964 478 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 AC107016.1-201ENST00000550463 337 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.38□□□□□ -1.71
LSM1O15116 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.38□□□□□ -1.71
LSM1O15116 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.38□□□□□ -1.71
LSM1O15116 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.38□□□□□ -1.71
LSM1O15116 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC008759.1-201ENST00000589783 983 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC009303.3-201ENST00000591103 736 ntBASIC4.38□□□□□ -1.71
LSM1O15116 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 AL512782.1-201ENST00000603093 364 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC084373.1-201ENST00000603311 235 ntBASIC4.38□□□□□ -1.71
LSM1O15116 AC010201.1-201ENST00000605051 540 ntBASIC4.38□□□□□ -1.71
LSM1O15116 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
LSM1O15116 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LSM1O15116 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.38□□□□□ -1.71
LSM1O15116 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LSM1O15116 AL627171.1-201ENST00000618845 1308 ntBASIC4.38□□□□□ -1.71
LSM1O15116 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LSM1O15116 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.37□□□□□ -1.71
LSM1O15116 RN7SKP149-201ENST00000363008 344 ntBASIC4.37□□□□□ -1.71
LSM1O15116 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LSM1O15116 RNU1-63P-201ENST00000383902 164 ntBASIC4.37□□□□□ -1.71
LSM1O15116 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 RNA5SP239-201ENST00000410218 129 ntBASIC4.37□□□□□ -1.71
LSM1O15116 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.37□□□□□ -1.71
LSM1O15116 RAD23BP1-201ENST00000421404 1227 ntBASIC4.37□□□□□ -1.71
LSM1O15116 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.37□□□□□ -1.71
LSM1O15116 HIGD1AP8-201ENST00000453927 274 ntBASIC4.37□□□□□ -1.71
LSM1O15116 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 RN7SL629P-201ENST00000489622 285 ntBASIC4.37□□□□□ -1.71
LSM1O15116 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 AC007016.1-201ENST00000512110 244 ntBASIC4.37□□□□□ -1.71
LSM1O15116 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LSM1O15116 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LSM1O15116 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.37□□□□□ -1.71
LSM1O15116 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.37□□□□□ -1.71
LSM1O15116 RN7SL753P-201ENST00000581238 290 ntBASIC4.37□□□□□ -1.71
LSM1O15116 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 AC073091.2-201ENST00000603205 907 ntBASIC4.37□□□□□ -1.71
LSM1O15116 MTCO2P22-201ENST00000603246 681 ntBASIC4.37□□□□□ -1.71
LSM1O15116 AC090953.1-201ENST00000604305 1092 ntBASIC4.37□□□□□ -1.71
LSM1O15116 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.37□□□□□ -1.71
LSM1O15116 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.37□□□□□ -1.71
LSM1O15116 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.37□□□□□ -1.71
LSM1O15116 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.37□□□□□ -1.71
LSM1O15116 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.37□□□□□ -1.71
LSM1O15116 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LSM1O15116 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LSM1O15116 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms