Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Gm8495-201ENSMUST00000188740 694 ntBASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Gm37292-201ENSMUST00000192062 758 ntBASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Zc3hc1Q80YV2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Gm37025-201ENSMUST00000195159 829 ntBASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Zc3hc1Q80YV2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Zc3hc1Q80YV2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Zc3hc1Q80YV2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Zc3hc1Q80YV2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zc3hc1Q80YV2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zc3hc1Q80YV2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Zc3hc1Q80YV2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Zc3hc1Q80YV2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms