Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
FntaQ61239 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
FntaQ61239 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FntaQ61239 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
FntaQ61239 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.62■□□□□ 0.41
FntaQ61239 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
FntaQ61239 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.62■□□□□ 0.41
FntaQ61239 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
FntaQ61239 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
FntaQ61239 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FntaQ61239 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
FntaQ61239 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
FntaQ61239 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.61■□□□□ 0.41
FntaQ61239 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FntaQ61239 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
FntaQ61239 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FntaQ61239 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.61■□□□□ 0.41
FntaQ61239 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.61■□□□□ 0.41
FntaQ61239 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.61■□□□□ 0.41
FntaQ61239 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FntaQ61239 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FntaQ61239 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
FntaQ61239 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FntaQ61239 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FntaQ61239 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FntaQ61239 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.61■□□□□ 0.41
FntaQ61239 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FntaQ61239 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
FntaQ61239 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
FntaQ61239 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FntaQ61239 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FntaQ61239 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FntaQ61239 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FntaQ61239 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.6■□□□□ 0.41
FntaQ61239 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
FntaQ61239 Gm37292-201ENSMUST00000192062 758 ntBASIC17.6■□□□□ 0.41
FntaQ61239 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.6■□□□□ 0.41
FntaQ61239 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
FntaQ61239 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FntaQ61239 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
FntaQ61239 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
FntaQ61239 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FntaQ61239 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
FntaQ61239 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
FntaQ61239 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Gm12382-201ENSMUST00000122005 922 ntBASIC17.59■□□□□ 0.41
FntaQ61239 Gm24841-201ENSMUST00000158676 357 ntBASIC17.59■□□□□ 0.41
FntaQ61239 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.59■□□□□ 0.41
FntaQ61239 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FntaQ61239 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
FntaQ61239 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FntaQ61239 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
FntaQ61239 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FntaQ61239 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FntaQ61239 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
FntaQ61239 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
FntaQ61239 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FntaQ61239 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms