Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.92■■□□□ 1.1
HTTP42858 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.92■■□□□ 1.1
HTTP42858 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTTP42858 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTTP42858 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.91■■□□□ 1.1
HTTP42858 AL662844.1-201ENST00000546340 181 ntBASIC21.91■■□□□ 1.1
HTTP42858 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.91■■□□□ 1.1
HTTP42858 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
HTTP42858 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.91■■□□□ 1.1
HTTP42858 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HTTP42858 MRPL3P1-201ENST00000400109 1033 ntBASIC21.91■■□□□ 1.1
HTTP42858 TSPY19P-201ENST00000418461 509 ntBASIC21.91■■□□□ 1.1
HTTP42858 TSPY18P-201ENST00000441642 509 ntBASIC21.91■■□□□ 1.1
HTTP42858 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.91■■□□□ 1.1
HTTP42858 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.91■■□□□ 1.1
HTTP42858 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTTP42858 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTTP42858 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTTP42858 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTTP42858 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
HTTP42858 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.9■■□□□ 1.1
HTTP42858 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 EP400NL-214ENST00000641289 2402 ntBASIC21.9■■□□□ 1.1
HTTP42858 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HTTP42858 TMEM179-206ENST00000616017 1645 ntBASIC21.9■■□□□ 1.1
HTTP42858 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HTTP42858 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
HTTP42858 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
HTTP42858 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.9■■□□□ 1.1
HTTP42858 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HTTP42858 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.9■■□□□ 1.1
HTTP42858 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.9■■□□□ 1.1
HTTP42858 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTTP42858 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTTP42858 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTTP42858 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.89■■□□□ 1.1
HTTP42858 KRT18P31-201ENST00000506277 1292 ntBASIC21.89■■□□□ 1.1
HTTP42858 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
HTTP42858 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.89■■□□□ 1.1
HTTP42858 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.89■■□□□ 1.1
HTTP42858 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.89■■□□□ 1.1
HTTP42858 MIR4674-201ENST00000582457 87 ntBASIC21.89■■□□□ 1.1
HTTP42858 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTTP42858 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTTP42858 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.89■■□□□ 1.09
HTTP42858 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.89■■□□□ 1.09
HTTP42858 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.89■■□□□ 1.09
HTTP42858 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTTP42858 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.89■■□□□ 1.09
HTTP42858 FP700111.2-201ENST00000619190 1892 ntBASIC21.88■■□□□ 1.09
HTTP42858 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTTP42858 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.88■■□□□ 1.09
HTTP42858 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HTTP42858 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.88■■□□□ 1.09
HTTP42858 BX640515.1-201ENST00000617215 977 ntBASIC21.88■■□□□ 1.09
HTTP42858 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.88■■□□□ 1.09
HTTP42858 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTTP42858 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HTTP42858 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HTTP42858 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTTP42858 SLC25A1P1-201ENST00000528351 927 ntBASIC21.88■■□□□ 1.09
HTTP42858 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.88■■□□□ 1.09
HTTP42858 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HTTP42858 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.88■■□□□ 1.09
HTTP42858 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HTTP42858 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTTP42858 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HTTP42858 KRT16P4-201ENST00000453883 522 ntBASIC21.87■■□□□ 1.09
HTTP42858 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HTTP42858 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
HTTP42858 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HTTP42858 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.87■■□□□ 1.09
HTTP42858 AL162741.1-201ENST00000565563 1558 ntBASIC21.87■■□□□ 1.09
HTTP42858 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms