Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
PTCD1O75127 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PTCD1O75127 AP000550.4-202ENST00000639755 178 ntBASIC24.96■■□□□ 1.59
PTCD1O75127 AL391422.3-201ENST00000603791 2761 ntBASIC24.96■■□□□ 1.59
PTCD1O75127 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCD1O75127 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PTCD1O75127 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCD1O75127 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PTCD1O75127 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
PTCD1O75127 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PTCD1O75127 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.96■■□□□ 1.59
PTCD1O75127 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PTCD1O75127 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCD1O75127 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCD1O75127 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD1O75127 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCD1O75127 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.95■■□□□ 1.58
PTCD1O75127 FAM86EP-206ENST00000510506 987 ntBASIC24.95■■□□□ 1.58
PTCD1O75127 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC24.95■■□□□ 1.58
PTCD1O75127 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC24.95■■□□□ 1.58
PTCD1O75127 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC24.95■■□□□ 1.58
PTCD1O75127 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD1O75127 AL691432.2-201ENST00000607222 2038 ntBASIC24.95■■□□□ 1.58
PTCD1O75127 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PTCD1O75127 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.95■■□□□ 1.58
PTCD1O75127 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PTCD1O75127 AC073314.1-201ENST00000568729 2216 ntBASIC24.94■■□□□ 1.58
PTCD1O75127 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.94■■□□□ 1.58
PTCD1O75127 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PTCD1O75127 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 PCED1CP-201ENST00000419887 785 ntBASIC24.94■■□□□ 1.58
PTCD1O75127 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 CA15P1-201ENST00000481698 905 ntBASIC24.94■■□□□ 1.58
PTCD1O75127 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC24.94■■□□□ 1.58
PTCD1O75127 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC24.94■■□□□ 1.58
PTCD1O75127 AC140113.3-201ENST00000605663 199 ntBASIC24.94■■□□□ 1.58
PTCD1O75127 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PTCD1O75127 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
PTCD1O75127 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.94■■□□□ 1.58
PTCD1O75127 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
PTCD1O75127 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC24.93■■□□□ 1.58
PTCD1O75127 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.93■■□□□ 1.58
PTCD1O75127 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC24.93■■□□□ 1.58
PTCD1O75127 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.93■■□□□ 1.58
PTCD1O75127 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCD1O75127 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCD1O75127 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC24.93■■□□□ 1.58
PTCD1O75127 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 KRT8P45-201ENST00000414328 1447 ntBASIC24.93■■□□□ 1.58
PTCD1O75127 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.93■■□□□ 1.58
PTCD1O75127 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.93■■□□□ 1.58
PTCD1O75127 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
PTCD1O75127 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.93■■□□□ 1.58
PTCD1O75127 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PTCD1O75127 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
PTCD1O75127 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
PTCD1O75127 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
PTCD1O75127 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PTCD1O75127 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC24.92■■□□□ 1.58
PTCD1O75127 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.92■■□□□ 1.58
PTCD1O75127 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PTCD1O75127 KRT18P56-201ENST00000507275 550 ntBASIC24.92■■□□□ 1.58
PTCD1O75127 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.92■■□□□ 1.58
PTCD1O75127 AL031432.5-201ENST00000641059 760 ntBASIC24.92■■□□□ 1.58
PTCD1O75127 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PTCD1O75127 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
PTCD1O75127 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PTCD1O75127 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC24.91■■□□□ 1.58
PTCD1O75127 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 AC009947.2-201ENST00000444014 672 ntBASIC24.91■■□□□ 1.58
PTCD1O75127 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.91■■□□□ 1.58
PTCD1O75127 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.91■■□□□ 1.58
PTCD1O75127 AL512604.3-201ENST00000569583 964 ntBASIC24.91■■□□□ 1.58
PTCD1O75127 DBP-204ENST00000599385 709 ntTSL 3 BASIC24.91■■□□□ 1.58
PTCD1O75127 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.91■■□□□ 1.58
PTCD1O75127 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC24.91■■□□□ 1.58
PTCD1O75127 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PTCD1O75127 AL512408.1-201ENST00000569378 2000 ntBASIC24.91■■□□□ 1.58
PTCD1O75127 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PTCD1O75127 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms