Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMIM28A0A1B0GU29 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 KRT8P41-201ENST00000533985 1514 ntBASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMIM28A0A1B0GU29 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 KRT18P21-201ENST00000515767 1272 ntBASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.86■□□□□ 0.93
SMIM28A0A1B0GU29 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 AC096733.2-201ENST00000609937 1394 ntBASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 PCDHAC2-203ENST00000615316 3011 ntBASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMIM28A0A1B0GU29 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 RCN1P1-201ENST00000400413 996 ntBASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.84■□□□□ 0.93
SMIM28A0A1B0GU29 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.83■□□□□ 0.93
SMIM28A0A1B0GU29 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms