Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Odf3b-204ENSMUST00000227834 930 ntBASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm29257-201ENSMUST00000186115 639 ntBASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3375-201ENSMUST00000203929 796 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms