Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 BX323046.1-201ENST00000610145 535 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 AC087894.3-201ENST00000623682 349 ntBASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHGA11Q9Y5H2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 AC134882.1-201ENST00000603738 1676 ntBASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 RIOK3P1-201ENST00000418778 1528 ntBASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 AC004014.2-201ENST00000623718 5122 ntBASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PCDHGA11Q9Y5H2 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR559-201ENST00000385188 96 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 SNORA75.4-201ENST00000391278 119 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL9P21-201ENST00000392269 505 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AL359715.1-201ENST00000404330 555 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC078974.1-201ENST00000411597 223 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC134879.1-201ENST00000426062 394 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC079781.2-201ENST00000446424 169 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC092421.1-201ENST00000448148 418 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 SLC25A18P1-201ENST00000449385 454 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AP1S2P1-201ENST00000457344 379 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 MTCO2P29-201ENST00000465212 189 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SL259P-201ENST00000478499 253 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 SCARNA18.2-201ENST00000516882 84 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SKP96-201ENST00000516948 297 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 IGLVV-66-201ENST00000523818 341 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR3171-201ENST00000584270 74 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 EXOSC3P2-201ENST00000594464 497 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SL126P-201ENST00000616400 299 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 C2orf27A-204ENST00000623058 969 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC091953.2-201ENST00000623979 160 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AC138305.3-201ENST00000624988 240 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 AL356585.10-201ENST00000641883 123 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 CDC27P2-201ENST00000425026 1922 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 CLCA3P-203ENST00000490028 2781 ntBASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHGA11Q9Y5H2 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 HSPA8P18-201ENST00000439846 1928 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 RBPJP7-201ENST00000442803 1447 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 RBPJP5-201ENST00000449433 1447 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 AC092162.3-201ENST00000624511 1624 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 OR4G1P-203ENST00000641984 1631 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.202-201ENST00000364083 110 ntBASIC6.7□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-169P-201ENST00000365336 107 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms