Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL645733.1-201ENST00000402250 217 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL591848.1-201ENST00000413092 322 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 CEACAMP8-201ENST00000413902 580 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC009237.10-201ENST00000414112 510 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC004074.1-201ENST00000421810 1063 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 RPS24P8-201ENST00000431490 402 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 NRBF2P3-201ENST00000432731 865 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 RPL31P44-201ENST00000447680 377 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC006511.1-201ENST00000470614 315 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC147055.1-201ENST00000509261 750 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC016180.1-201ENST00000567945 403 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 MIR4458-201ENST00000578872 75 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 RN7SL176P-201ENST00000580352 264 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC011477.5-201ENST00000586571 259 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL031320.1-201ENST00000604177 357 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC244517.3-201ENST00000616254 1235 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AP003072.4-201ENST00000624580 310 ntBASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RHBDD3Q9Y3P4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
RHBDD3Q9Y3P4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC093311.1-201ENST00000506586 2021 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP149-201ENST00000363008 344 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP44-201ENST00000363602 316 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AL078604.1-201ENST00000404609 466 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RNA5SP113-201ENST00000410486 84 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RSU1P3-201ENST00000412878 835 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 ATG4AP1-201ENST00000416893 538 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RPL21P91-201ENST00000429231 479 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC023512.1-201ENST00000444513 499 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 H2AFZP5-201ENST00000446960 382 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC108463.1-201ENST00000450258 347 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC090142.1-201ENST00000465776 462 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC011037.1-201ENST00000483964 558 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC025164.1-201ENST00000496249 478 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 OR4V1P-201ENST00000525394 1140 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 MIR3667-201ENST00000581025 74 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC135803.1-201ENST00000608748 565 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC107905.1-201ENST00000616204 426 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC116563.2-201ENST00000624751 535 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AC100871.1-201ENST00000507871 1456 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 RNF6P1-201ENST00000444889 1784 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 AL355852.1-201ENST00000454081 1771 ntBASIC4.02□□□□□ -1.77
RHBDD3Q9Y3P4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC131971.1-201ENST00000332881 1482 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AL121834.1-202ENST00000404494 277 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 RPS6P12-201ENST00000432491 726 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AC097523.2-201ENST00000435551 652 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 RPL7P61-201ENST00000451721 751 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SL329P-201ENST00000467740 299 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 NDUFB5P1-201ENST00000508134 564 ntBASIC4.01□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP276-201ENST00000516242 268 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms