Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.16□□□□□ -1.1
PDZRN3Q9UPQ7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC027279.1-201ENST00000568885 4284 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 RNU6-660P-201ENST00000364566 109 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 RN7SKP81-201ENST00000365603 331 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AL353625.1-202ENST00000366273 571 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC087752.1-201ENST00000391360 558 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 GSTA9P-201ENST00000406231 611 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AIMP1P1-201ENST00000418670 937 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 CHEK2P5-201ENST00000423877 246 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 CALM1P1-201ENST00000442082 433 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 OR51B8P-201ENST00000449892 769 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 VN1R38P-201ENST00000450265 887 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 OFD1P4Y-201ENST00000455273 1179 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 snoU109.5-201ENST00000516231 132 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC245014.2-201ENST00000603689 287 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC246785.4-201ENST00000605374 287 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 RPSAP75-201ENST00000605848 301 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AL080312.2-201ENST00000613001 630 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 MIR6886-201ENST00000619864 61 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 AC022509.4-201ENST00000621404 572 ntBASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PDZRN3Q9UPQ7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
PDZRN3Q9UPQ7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
PDZRN3Q9UPQ7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PDZRN3Q9UPQ7 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.15□□□□□ -1.11
PDZRN3Q9UPQ7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RNU5E-8P-201ENST00000363502 116 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SKP69-201ENST00000365390 305 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AL031985.1-201ENST00000392713 418 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SKP108-201ENST00000411367 328 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LDHAP2-201ENST00000437325 985 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AL591363.1-201ENST00000450091 483 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RPS20P20-201ENST00000460498 340 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RPL7P19-201ENST00000469948 618 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 HMGB1P3-201ENST00000502802 616 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 HIF1AP1-201ENST00000553642 175 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC092332.1-201ENST00000563684 829 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC008521.2-201ENST00000591021 259 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 MTCO3P22-201ENST00000603219 784 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC022893.3-201ENST00000607665 437 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC090527.3-201ENST00000619041 548 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 FAM27E2-201ENST00000619668 403 ntBASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms