Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 AC131238.1-201ENST00000617135 328 ntBASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 AC104820.1-201ENST00000624183 307 ntBASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 AP003497.2-201ENST00000624220 967 ntBASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 AL137100.1-201ENST00000556703 1620 ntBASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 SMG1P6-201ENST00000532337 2930 ntBASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.3□□□□□ -1.72
NPIPA1Q9UND3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC091046.3-201ENST00000631455 1574 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 MIR320B1-201ENST00000390209 79 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 VN1R37P-201ENST00000419096 748 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC048351.1-201ENST00000420064 602 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC099336.2-201ENST00000422457 254 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 RPS27AP7-201ENST00000422792 455 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC114878.1-201ENST00000441166 358 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 MTND3P4-201ENST00000453537 303 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC099560.2-201ENST00000457554 255 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC068587.1-201ENST00000483613 781 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC138938.1-201ENST00000515431 782 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AF186190.1-201ENST00000517470 480 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC093249.4-201ENST00000564755 259 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC069061.3-201ENST00000582254 823 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AL133247.2-201ENST00000603236 482 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AL445423.1-201ENST00000609941 536 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC015804.1-201ENST00000622935 435 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC079298.2-201ENST00000623885 459 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC011815.3-201ENST00000624194 473 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 BX005019.1-201ENST00000561881 1810 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 DDX18P3-201ENST00000404856 2007 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 AC026951.1-201ENST00000559530 2459 ntBASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.29□□□□□ -1.72
NPIPA1Q9UND3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AP001642.1-201ENST00000624727 2117 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 MAPK10-303ENST00000641324 3959 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 RNU6-666P-201ENST00000363499 107 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 RNA5SP447-201ENST00000363749 119 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 SNORA27.3-201ENST00000364937 134 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 MIR129-1-201ENST00000384972 72 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AL592291.1-201ENST00000403830 352 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 RN7SKP267-201ENST00000410381 285 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 RPL12P28-201ENST00000430852 489 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 MTCYBP12-201ENST00000440559 1134 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AL162591.2-201ENST00000449634 317 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 TPT1P1-201ENST00000458495 518 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AC112206.1-201ENST00000468416 477 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 METTL15P1-201ENST00000481421 1045 ntBASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.28□□□□□ -1.72
NPIPA1Q9UND3 RNU6-889P-201ENST00000517189 103 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms