Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPL10P14-201ENST00000565265 298 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 MIR6820-201ENST00000611508 62 ntBASIC5.4□□□□□ -1.54
DKK3Q9UBP4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.4□□□□□ -1.54
DKK3Q9UBP4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
DKK3Q9UBP4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
DKK3Q9UBP4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
DKK3Q9UBP4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.4□□□□□ -1.55
DKK3Q9UBP4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.4□□□□□ -1.55
DKK3Q9UBP4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.4□□□□□ -1.55
DKK3Q9UBP4 MTCO1P18-201ENST00000455518 1419 ntBASIC5.4□□□□□ -1.55
DKK3Q9UBP4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC100757.1-201ENST00000616872 1835 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 HSPA8P18-201ENST00000439846 1928 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC104118.1-201ENST00000607625 1589 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 U3.2-201ENST00000362981 210 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RNU6-178P-201ENST00000384631 104 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 MCTS2P-201ENST00000394552 546 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 SFR1P1-201ENST00000403720 688 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 OR4K12P-201ENST00000406538 961 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 MIR1302-8-201ENST00000408342 128 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC009302.1-201ENST00000417147 390 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC016907.1-201ENST00000419483 435 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 VDAC1P6-201ENST00000430062 855 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AP000936.3-201ENST00000438127 255 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 MED28P3-201ENST00000444288 531 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RPL34P26-201ENST00000445636 354 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AL133217.1-201ENST00000450980 425 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RAP1BP2-201ENST00000478270 544 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RPL7P40-201ENST00000481703 745 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RN7SL727P-201ENST00000482164 296 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC107398.1-201ENST00000486904 505 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC023050.1-201ENST00000498198 304 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 NDUFA5P12-201ENST00000503796 343 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 OR5BM1P-201ENST00000512021 366 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC090819.1-201ENST00000523800 1111 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC087373.1-201ENST00000524920 491 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC006518.2-201ENST00000542513 940 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 FAM106CP-201ENST00000582212 507 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC069307.1-201ENST00000602820 447 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 DPRXP5-201ENST00000604662 539 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC121247.2-201ENST00000604776 136 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AL133507.1-201ENST00000605269 557 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC024940.4-201ENST00000605507 246 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC018638.7-201ENST00000605836 1114 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC011374.2-201ENST00000607135 526 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC090527.3-201ENST00000619041 548 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC131159.1-201ENST00000621854 213 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 AC098679.4-201ENST00000624241 654 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 Z98755.1-201ENST00000407015 1384 ntBASIC5.39□□□□□ -1.55
DKK3Q9UBP4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
DKK3Q9UBP4 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.38□□□□□ -1.55
DKK3Q9UBP4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.38□□□□□ -1.55
DKK3Q9UBP4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms