Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 BLZF2P-201ENST00000553776 1130 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC084757.1-201ENST00000559987 490 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 NPM1P42-201ENST00000560329 862 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC107952.2-201ENST00000606048 486 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC087683.2-201ENST00000611384 326 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC023158.2-201ENST00000614876 543 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC079395.3-201ENST00000615161 484 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 AC068870.1-201ENST00000563737 2455 ntBASIC5.05□□□□□ -1.6
LRFN1Q9P244 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LRFN1Q9P244 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.05□□□□□ -1.6
LRFN1Q9P244 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 DCAF13P3-201ENST00000561147 1334 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC005294.1-201ENST00000355509 281 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 RNU6-582P-201ENST00000362989 107 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 RNA5SP443-201ENST00000363083 132 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 SNORD116.1-201ENST00000365628 92 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL450992.3-201ENST00000413192 568 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC007161.1-204ENST00000423039 460 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC233981.1-201ENST00000423224 461 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 USP9YP22-201ENST00000438971 294 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 PTMAP3-201ENST00000447474 330 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 NF1P3-201ENST00000457709 450 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL139824.2-201ENST00000458731 1095 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC008953.1-201ENST00000497334 318 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC021146.5-201ENST00000503544 545 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC011352.3-201ENST00000505162 593 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 PGAM1P13-201ENST00000507497 754 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC112673.1-201ENST00000513168 575 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 RN7SKP253-201ENST00000516424 309 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 SOD1P3-201ENST00000518682 454 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC136777.2-201ENST00000522979 358 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 HAUS8P1-201ENST00000549005 542 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC126177.5-201ENST00000549599 178 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC090515.3-201ENST00000560431 315 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC069366.1-201ENST00000583159 838 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 MIR4512-201ENST00000583257 77 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 MIR7155-201ENST00000615925 56 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC074101.1-201ENST00000637861 241 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 OR4F13P-202ENST00000560066 2054 ntBASIC5.04□□□□□ -1.6
LRFN1Q9P244 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.04□□□□□ -1.6
LRFN1Q9P244 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRFN1Q9P244 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.03□□□□□ -1.6
LRFN1Q9P244 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRFN1Q9P244 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRFN1Q9P244 AC006210.2-201ENST00000367074 1545 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms