Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC007546.1-201ENST00000619452 559 ntBASIC4.1□□□□□ -1.75
VAPAQ9P0L0 AC138907.10-201ENST00000623708 983 ntBASIC4.1□□□□□ -1.75
VAPAQ9P0L0 CIR1P2-201ENST00000514821 1342 ntBASIC4.1□□□□□ -1.75
VAPAQ9P0L0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
VAPAQ9P0L0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
VAPAQ9P0L0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAPAQ9P0L0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.1□□□□□ -1.75
VAPAQ9P0L0 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
VAPAQ9P0L0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VAPAQ9P0L0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VAPAQ9P0L0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 RNA5SP388-201ENST00000362584 119 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 MIR3065-201ENST00000390137 79 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL645927.1-201ENST00000396783 406 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 RCC2P2-201ENST00000422174 918 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC104837.2-201ENST00000427236 424 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 ELOCP18-201ENST00000434209 337 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 RAB28P3-201ENST00000448325 597 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 CLIC4P1-201ENST00000453177 535 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL354710.1-201ENST00000453641 246 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC053481.1-201ENST00000467217 306 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC104164.2-201ENST00000496953 495 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 OR5BC1P-201ENST00000529327 739 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AP000676.2-201ENST00000529711 301 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 UBTFL9-201ENST00000534504 1148 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AP001160.4-201ENST00000596971 382 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AC004948.1-201ENST00000609858 672 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AL121873.1-201ENST00000616013 524 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 AP000756.2-201ENST00000624168 2567 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VAPAQ9P0L0 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.09□□□□□ -1.75
VAPAQ9P0L0 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.76
VAPAQ9P0L0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
VAPAQ9P0L0 CR788268.1-201ENST00000603931 1809 ntBASIC4.09□□□□□ -1.76
VAPAQ9P0L0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
VAPAQ9P0L0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
VAPAQ9P0L0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 MIR298-201ENST00000401212 88 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 SNORA11.3-201ENST00000408471 128 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC009313.2-201ENST00000417893 1941 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AL161631.1-201ENST00000417933 486 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 RPS26P13-201ENST00000419030 330 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC004552.1-201ENST00000419089 348 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 MTCYBP7-201ENST00000419540 1134 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 RPL7AP25-201ENST00000423357 805 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 ELOCP8-201ENST00000439309 332 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 ELOCP15-201ENST00000442090 332 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 BRAFP1-201ENST00000445336 2703 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 DHFRP3-201ENST00000455595 559 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 SEPT14P1-201ENST00000458703 648 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 RPS26P3-201ENST00000470205 348 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 RN7SL585P-201ENST00000470538 280 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC096741.1-201ENST00000472250 846 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC090543.2-201ENST00000483963 348 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC004057.1-201ENST00000485827 348 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 RN7SL812P-201ENST00000493791 279 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC025554.1-201ENST00000505641 188 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.08□□□□□ -1.76
VAPAQ9P0L0 VTA1P2-201ENST00000520205 911 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 AC022616.2-201ENST00000523185 300 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 NPM1P35-201ENST00000533043 868 ntBASIC4.08□□□□□ -1.76
VAPAQ9P0L0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms