Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL391497.1-201ENST00000608671 547 ntBASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 AC008498.1-201ENST00000613012 531 ntBASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 AP002799.1-201ENST00000623552 423 ntBASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 UGT2B26P-201ENST00000508672 1613 ntBASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDLIM7Q9NR12 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC073544.1-201ENST00000600110 1595 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 HSPA8P18-201ENST00000439846 1928 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 RNA5SP339-201ENST00000390987 122 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 RPL26P29-201ENST00000415623 438 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 LINC01347-201ENST00000417964 355 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 PAICSP7-201ENST00000419829 962 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AL590103.1-201ENST00000434488 307 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 CALM1P2-201ENST00000452941 448 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 DNAJB5P1-201ENST00000454004 806 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AL389915.2-201ENST00000454576 441 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC037198.2-201ENST00000478845 733 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 RPL7P18-201ENST00000478965 734 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 NCOR1P1-202ENST00000486162 291 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC109462.1-201ENST00000491087 368 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 HSPE1P23-201ENST00000509838 286 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 BTG4P1-201ENST00000510421 183 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC010285.3-201ENST00000511668 676 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 HNRNPKP5-201ENST00000515300 253 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 PRELID3BP4-201ENST00000515476 571 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC106038.2-201ENST00000520706 568 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 OR5AZ1P-201ENST00000527448 943 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC016957.1-201ENST00000534895 309 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MTCO1P40-201ENST00000574371 625 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MTND1P15-201ENST00000579262 949 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MIR4480-201ENST00000582492 71 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC060780.2-201ENST00000589047 198 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MTCYBP22-201ENST00000603788 447 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC080013.4-201ENST00000607624 649 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC126118.1-201ENST00000607744 628 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 FAM25E-202ENST00000608562 189 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AC025574.2-201ENST00000615621 514 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 AL356266.1-201ENST00000623311 483 ntBASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDLIM7Q9NR12 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 AL034546.1-201ENST00000623740 3693 ntBASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 AC010329.1-201ENST00000593903 8328 ntBASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDLIM7Q9NR12 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms