Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
RTN4Q9NQC3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL161891.1-201ENST00000621575 4636 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 RNU6-1227P-201ENST00000383981 107 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 RNU6-837P-201ENST00000391056 108 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 CYCSP5-201ENST00000415043 297 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL672212.1-201ENST00000422246 400 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL353678.1-201ENST00000422735 741 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL590399.6-201ENST00000446396 307 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 DEFA10P-201ENST00000455014 288 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 RNU6-329P-201ENST00000459618 107 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC011476.1-201ENST00000466725 307 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 GLRXP3-201ENST00000470810 321 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 RN7SL448P-201ENST00000475566 295 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 RN7SL432P-201ENST00000484057 298 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL023284.4-201ENST00000564248 374 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 IGHV3OR16-15-201ENST00000565463 414 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 RN7SL154P-201ENST00000578043 324 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC245052.7-201ENST00000601161 359 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC011500.1-201ENST00000601963 469 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC012443.1-201ENST00000605605 231 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL022394.1-201ENST00000606979 292 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AP004247.4-201ENST00000608484 942 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC037198.3-201ENST00000616754 526 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AL355987.5-201ENST00000621585 411 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC005858.4-201ENST00000623191 700 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 MAPK10-304ENST00000641341 3984 ntBASIC8.87□□□□□ -0.99
RTN4Q9NQC3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
RTN4Q9NQC3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 SNX18P3-202ENST00000565670 1750 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 RNU6-989P-201ENST00000362756 107 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 Y_RNA.474-201ENST00000384341 102 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 Y_RNA.530-201ENST00000384587 101 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 KRTAP9-1-201ENST00000398470 753 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 MIR1269A-201ENST00000408636 105 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 ASH2LP1-201ENST00000438037 985 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 RN7SL700P-201ENST00000496982 294 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AC026801.2-201ENST00000515352 425 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 RNU4-49P-201ENST00000516080 140 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 Y_RNA.691-201ENST00000516611 103 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 MTND4P7-201ENST00000523876 130 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 SERPINA15P-201ENST00000529287 266 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AP005435.4-201ENST00000529514 284 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AC104046.1-201ENST00000559487 406 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC8.86□□□□□ -0.99
RTN4Q9NQC3 CR382285.1-202ENST00000604687 547 ntBASIC8.86□□□□□ -0.99
RTN4Q9NQC3 AC113139.1-201ENST00000605049 239 ntBASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms