Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC063976.2-201ENST00000425667 3556 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC011447.7-201ENST00000624228 1590 ntBASIC4.86□□□□□ -1.63
BRF2Q9HAW0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.86□□□□□ -1.63
BRF2Q9HAW0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 ANKRD36P1-201ENST00000344424 659 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RNU1-43P-201ENST00000365052 165 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 MCTS2P-201ENST00000394552 546 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 DUTP5-201ENST00000406790 469 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 USP9YP21-201ENST00000420603 432 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 DDX39BP1-205ENST00000422507 192 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RPS29P9-201ENST00000440360 171 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AL391987.1-201ENST00000441025 200 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC012512.1-201ENST00000446594 718 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 BTF3P6-201ENST00000448054 499 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 EXOSC3P1-201ENST00000448649 500 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RPL6P9-201ENST00000466502 859 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RN7SL101P-201ENST00000496350 279 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 NDUFS5P6-201ENST00000529136 295 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RPAP2P1-201ENST00000603626 1168 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC090948.2-201ENST00000607363 564 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC126915.2-201ENST00000610957 190 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC008115.4-201ENST00000619780 775 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC099494.2-201ENST00000623371 978 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AL121594.5-201ENST00000631724 573 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 BX649567.1-201ENST00000642071 1134 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 ASNSP1-201ENST00000518311 1939 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AC007529.1-201ENST00000418574 2178 ntBASIC4.85□□□□□ -1.63
BRF2Q9HAW0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
BRF2Q9HAW0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC011155.1-201ENST00000316512 456 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RN7SKP74-201ENST00000362849 309 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RNA5SP435-201ENST00000364044 108 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 TMSB4XP8-201ENST00000402089 135 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MIR1286-201ENST00000408112 78 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 SNORA77-201ENST00000408716 125 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RN7SKP126-201ENST00000411143 300 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 RPL35AP24-201ENST00000413846 330 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 BTF3P8-201ENST00000414577 526 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 TMSB4XP6-201ENST00000415187 135 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 TMSB4XP1-201ENST00000424567 135 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AL389925.1-201ENST00000432257 728 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 MTCYBP15-201ENST00000433123 1127 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 AL450023.3-201ENST00000440592 271 ntBASIC4.84□□□□□ -1.63
BRF2Q9HAW0 TXNP5-201ENST00000441043 315 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms