Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL590290.1-201ENST00000405336 380 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 MIR548F1-201ENST00000408667 84 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AL354890.1-201ENST00000413730 346 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 TMEM183AP1-205ENST00000432739 290 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 GAPDHP48-201ENST00000436626 961 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 EIF5AP4-201ENST00000441206 465 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 FHP1-201ENST00000442741 703 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 RPL5P7-201ENST00000444235 813 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC097463.1-201ENST00000447288 481 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS11Q9H270 ZNF114P1-201ENST00000453500 292 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC138853.1-201ENST00000503549 823 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 PRMT5P1-201ENST00000514351 598 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 WBP1LP3-201ENST00000523033 208 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 IGLV3-30-201ENST00000524362 298 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AP002963.1-201ENST00000530590 184 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC122688.1-201ENST00000541494 223 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 RAB11AP2-201ENST00000545905 639 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 BLZF2P-201ENST00000553776 1130 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC068714.1-201ENST00000559623 800 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS11Q9H270 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS11Q9H270 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS11Q9H270 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS11Q9H270 COX6CP7-201ENST00000597056 208 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 BNIP3P33-201ENST00000598912 569 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC078795.3-201ENST00000602913 472 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 DUXAP11-201ENST00000603858 526 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC106791.2-201ENST00000604680 391 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC090186.1-201ENST00000605991 572 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AL136131.3-201ENST00000607600 188 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS11Q9H270 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC072046.2-201ENST00000618366 268 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 AC139769.3-201ENST00000618383 175 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 FP325313.1-201ENST00000638228 703 ntBASIC5.68□□□□□ -1.5
VPS11Q9H270 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS11Q9H270 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VPS11Q9H270 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS11Q9H270 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 RNF6P1-201ENST00000444889 1784 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS11Q9H270 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC073055.1-201ENST00000456901 1621 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC068870.1-201ENST00000563737 2455 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC100871.1-201ENST00000507871 1456 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VPS11Q9H270 RN7SKP250-201ENST00000363924 321 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 OR6C69P-201ENST00000394268 893 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC092745.2-202ENST00000411880 369 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AL357752.1-201ENST00000412817 349 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 TNPO1P1-201ENST00000423641 1138 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC012519.1-201ENST00000424588 610 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 MTND1P2-201ENST00000430604 821 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 CDY14P-201ENST00000431260 1014 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC092641.1-201ENST00000440229 772 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AL050341.1-201ENST00000447743 313 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 MTCO1P48-201ENST00000448024 1096 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 OTX2P1-201ENST00000450956 354 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 CDY23P-201ENST00000451661 1014 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS11Q9H270 AC044810.1-201ENST00000480271 711 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 ATP5LP5-201ENST00000483050 299 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC041039.1-201ENST00000485656 536 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 RN7SL57P-201ENST00000493687 290 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC109458.1-201ENST00000508858 316 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC104108.1-201ENST00000509930 412 ntBASIC5.67□□□□□ -1.5
VPS11Q9H270 AC079140.3-201ENST00000511111 550 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms