Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL591438.1-201ENST00000433508 581 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 MUPP-201ENST00000438111 566 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL360221.1-201ENST00000445989 335 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 HMGB1P16-201ENST00000447155 540 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 RBMY2TP-201ENST00000451162 947 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL445665.1-202ENST00000452436 324 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 YWHAEP1-201ENST00000453697 763 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 GAPDHP36-201ENST00000480688 918 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 NENFP3-201ENST00000503735 313 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 WBP1LP4-201ENST00000505043 344 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC027369.5-201ENST00000533838 755 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 UBE2NP1-201ENST00000545592 458 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC116553.2-201ENST00000564203 463 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 ACTR3BP3-201ENST00000565577 979 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC010547.6-201ENST00000571789 193 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 MIR3176-201ENST00000582210 90 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 H3F3BP2-201ENST00000583907 357 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 VN1R90P-201ENST00000595717 726 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC006539.2-201ENST00000601729 572 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 SUMO2P15-201ENST00000604285 278 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC064872.1-201ENST00000604823 1072 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AL451074.6-201ENST00000608512 729 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC016769.4-201ENST00000616893 535 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC091932.2-201ENST00000623014 291 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AF001550.2-201ENST00000636643 217 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 FP325313.1-201ENST00000638228 703 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC003973.3-201ENST00000624863 2822 ntBASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AMBRA1Q9C0C7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 OR56B2P-201ENST00000317102 954 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 IL6STP1-201ENST00000346911 1020 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 MIR375-201ENST00000362103 64 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC104297.1-201ENST00000393779 870 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 MIR1178-201ENST00000408396 91 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-648P-201ENST00000410190 107 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 COX5BP7-201ENST00000414780 274 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC234781.4-201ENST00000419384 244 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 HSPD1P12-201ENST00000429127 1069 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 DLGAP5P1-201ENST00000430307 464 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 USP9YP31-201ENST00000431405 881 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AL627308.1-201ENST00000435693 821 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 USP9YP22-201ENST00000438971 294 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AL138878.2-201ENST00000440581 1241 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 RPL36AP39-201ENST00000445859 318 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 ELOCP30-201ENST00000447108 299 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SBDSP1-204ENST00000453858 737 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC021660.1-201ENST00000465006 554 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 RPL7P18-201ENST00000478965 734 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC073358.1-201ENST00000505671 684 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 MTND3P5-201ENST00000512798 333 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AL117351.2-201ENST00000513571 157 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 SNORA70.20-201ENST00000516848 126 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 AP001317.1-201ENST00000531194 960 ntBASIC5.13□□□□□ -1.59
AMBRA1Q9C0C7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms